Approaches to estimating inbreeding coefficients in clinical isolates of Plasmodium falciparum from genomic sequence data

by O’Brien, John D., Amenga-Etego, Lucas, Li, Ruiqi
Published 2016

Socio-demographic and environmental determinants of infectious disease morbidity in children under 5 years in Ghana

by Amugsi, Dickson A., Aborigo, Raymond A., Oduro, Abraham R., Asoala, Victor, Awine, Timothy, Amenga-Etego, Lucas
Published 2015

A Bayesian Approach to Inferring the Phylogenetic Structure of Communities from Metagenomic Data

by O’Brien, John D., Didelot, Xavier, Iqbal, Zamin, Amenga-Etego, Lucas, Ahiska, Bartu, Falush, Daniel
Published 2014

Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data

by O’Brien, John D., Iqbal, Zamin, Wendler, Jason, Amenga-Etego, Lucas
Published 2016

Seeking consent to genetic and genomic research in a rural Ghanaian setting: A qualitative study of the MalariaGEN experience

by Tindana, Paulina, Bull, Susan, Amenga-Etego, Lucas, de Vries, Jantina, Aborigo, Raymond, Koram, Kwadwo, Kwiatkowski, Dominic, Parker, Michael
Published 2012

Haplotype Analyses of Haemoglobin C and Haemoglobin S and the Dynamics of the Evolutionary Response to Malaria in Kassena-Nankana District of Ghana

by Ghansah, Anita, Rockett, Kirk A., Clark, Taane G., Wilson, Michael D., Koram, Kwadwo A., Oduro, Abraham R., Amenga-Etego, Lucas, Anyorigiya, Thomas, Hodgson, Abraham, Milligan, Paul, Rogers, William O., Kwiatkowski, Dominic P.
Published 2012

Integrated Community Case Management of Fever in Children under Five Using Rapid Diagnostic Tests and Respiratory Rate Counting: A Multi-Country Cluster Randomized Trial

by Mukanga, David, Tiono, Alfred B., Anyorigiya, Thomas, Källander, Karin, Konaté, Amadou T., Oduro, Abraham R., Tibenderana, James K., Amenga-Etego, Lucas, Sirima, Sodiomon B., Cousens, Simon, Barnish, Guy, Pagnoni, Franco
Published 2012

Whole genome sequencing of Plasmodium falciparum from dried blood spots using selective whole genome amplification

by Oyola, Samuel O., Ariani, Cristina V., Hamilton, William L., Kekre, Mihir, Amenga-Etego, Lucas N., Ghansah, Anita, Rutledge, Gavin G., Redmond, Seth, Manske, Magnus, Jyothi, Dushyanth, Jacob, Chris G., Otto, Thomas D., Rockett, Kirk, Newbold, Chris I., Berriman, Matthew, Kwiatkowski, Dominic P.
Published 2016

Admixture into and within sub-Saharan Africa

by Busby, George BJ, Band, Gavin, Si Le, Quang, Jallow, Muminatou, Bougama, Edith, Mangano, Valentina D, Amenga-Etego, Lucas N, Enimil, Anthony, Apinjoh, Tobias, Ndila, Carolyne M, Manjurano, Alphaxard, Nyirongo, Vysaul, Doumba, Ogobara, Rockett, Kirk A, Kwiatkowski, Dominic P, Spencer, Chris CA
Published 2016

Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

by Manske, Magnus, Miotto, Olivo, Campino, Susana, Auburn, Sarah, Almagro-Garcia, Jacob, Maslen, Gareth, O’Brien, Jack, Djimde, Abdoulaye, Doumbo, Ogobara, Zongo, Issaka, Ouedraogo, Jean-Bosco, Michon, Pascal, Mueller, Ivo, Siba, Peter, Nzila, Alexis, Borrmann, Steffen, Kiara, Steven M., Marsh, Kevin, Jiang, Hongying, Su, Xin-Zhuan, Amaratunga, Chanaki, Fairhurst, Rick, Socheat, Duong, Nosten, Francois, Imwong, Mallika, White, Nicholas J., Sanders, Mandy, Anastasi, Elisa, Alcock, Dan, Drury, Eleanor, Oyola, Samuel, Quail, Michael A., Turner, Daniel J., Rubio, Valentin Ruano, Jyothi, Dushyanth, Amenga-Etego, Lucas, Hubbart, Christina, Jeffreys, Anna, Rowlands, Kate, Sutherland, Colin, Roper, Cally, Mangano, Valentina, Modiano, David, Tan, John C., Ferdig, Michael T., Amambua-Ngwa, Alfred, Conway, David J., Takala-Harrison, Shannon, Plowe, Christopher V., Rayner, Julian C., Rockett, Kirk A., Clark, Taane G., Newbold, Chris I., Berriman, Matthew, MacInnis, Bronwyn, Kwiatkowski, Dominic P.
Published 2012

Multiple populations of artemisinin-resistant Plasmodium falciparum in Cambodia

by Miotto, Olivo, Almagro-Garcia, Jacob, Manske, Magnus, MacInnis, Bronwyn, Campino, Susana, Rockett, Kirk A, Amaratunga, Chanaki, Lim, Pharath, Suon, Seila, Sreng, Sokunthea, Anderson, Jennifer M, Duong, Socheat, Nguon, Chea, Chuor, Char Meng, Saunders, David, Se, Youry, Lon, Chantap, Fukuda, Mark M, Amenga-Etego, Lucas, Hodgson, Abraham VO, Asoala, Victor, Imwong, Mallika, Takala-Harrison, Shannon, Nosten, Francois, Su, Xin-zhuan, Ringwald, Pascal, Ariey, Frédéric, Dolecek, Christiane, Hien, Tran Tinh, Boni, Maciej F, Thai, Cao Quang, Amambua-Ngwa, Alfred, Conway, David J, Djimdé, Abdoulaye A, Doumbo, Ogobara K, Zongo, Issaka, Ouedraogo, Jean-Bosco, Alcock, Daniel, Drury, Eleanor, Auburn, Sarah, Koch, Oliver, Sanders, Mandy, Hubbart, Christina, Maslen, Gareth, Ruano-Rubio, Valentin, Jyothi, Dushyanth, Miles, Alistair, O’Brien, John, Gamble, Chris, Oyola, Samuel O, Rayner, Julian C, Newbold, Chris I, Berriman, Matthew, Spencer, Chris CA, McVean, Gilean, Day, Nicholas P, White, Nicholas J, Bethell, Delia, Dondorp, Arjen M, Plowe, Christopher V, Fairhurst, Rick M, Kwiatkowski, Dominic P
Published 2013

Reappraisal of known malaria resistance loci in a large multi-centre study

by Rockett, Kirk A., Clarke, Geraldine M., Fitzpatrick, Kathryn, Hubbart, Christina, Jeffreys, Anna E., Rowlands, Kate, Craik, Rachel, Jallow, Muminatou, Conway, David J., Bojang, Kalifa A., Pinder, Margaret, Usen, Stanley, Sisay-Joof, Fatoumatta, Sirugo, Giorgio, Toure, Ousmane, Thera, Mahamadou A., Konate, Salimata, Sissoko, Sibiry, Niangaly, Amadou, Poudiougou, Belco, Mangano, Valentina D., Bougouma, Edith C., Sirima, Sodiomon B., Modiano, David, Amenga-Etego, Lucas N., Ghansah, Anita, Koram, Kwadwo A., Wilson, Michael D., Enimil, Anthony, Evans, Jennifer, Amodu, Olukemi, Olaniyan, Subulade, Apinjoh, Tobias, Mugri, Regina, Ndi, Andre, Ndila, Carolyne M., Uyoga, Sophie, Macharia, Alexander, Peshu, Norbert, Williams, Thomas N., Manjurano, Alphaxard, Riley, Eleanor, Drakeley, Chris, Reyburn, Hugh, Nyirongo, Vysaul, Kachala, David, Molyneux, Malcolm, Dunstan, Sarah J., Phu, Nguyen Hoan, Ngoc Quyen, Nguyen Thi, Thai, Cao Quang, Hien, Tran Tinh, Manning, Laurens, Laman, Moses, Siba, Peter, Karunajeewa, Harin, Allen, Steve, Allen, Angela, Davis, Timothy M. E., Michon, Pascal, Mueller, Ivo, Green, Angie, Molloy, Sile, Johnson, Kimberly J., Kerasidou, Angeliki, Cornelius, Victoria, Hart, Lee, Vanderwal, Aaron, SanJoaquin, Miguel, Band, Gavin, Le, Si Quang, Pirinen, Matti, Sepúlveda, Nuno, Spencer, Chris C.A., Clark, Taane G., Agbenyega, Tsiri, Achidi, Eric, Doumbo, Ogobara, Farrar, Jeremy, Marsh, Kevin, Taylor, Terrie, Kwiatkowski, Dominic P.
Published 2014