Stable evolutionary signal in a Yeast protein interaction network

by Wuchty, Stefan, Barabási, Albert-Laszlo, Ferdig, Michael T
Published 2006

Quantitative trait loci mapping reveals candidate pathways regulating cell cycle duration in Plasmodium falciparum

by Reilly Ayala, Heather B, Wacker , Mark A, Siwo, Geoffrey, Ferdig, Michael T
Published 2010

The landscape of inherited and de novo copy number variants in a plasmodium falciparum genetic cross

by Samarakoon, Upeka, Gonzales, Joseph M, Patel, Jigar J, Tan, Asako, Checkley, Lisa, Ferdig, Michael T
Published 2011

Quantification of multiple infections of Plasmodium falciparum in vitro

by Wacker, Mark A, Turnbull, Lindsey B, Walker, Leah A, Mount, Michael C, Ferdig, Michael T
Published 2012

Prediction of fine-tuned promoter activity from DNA sequence

by Siwo, Geoffrey, Rider, Andrew, Tan, Asako, Pinapati, Richard, Emrich, Scott, Chawla, Nitesh, Ferdig, Michael
Published 2016

An integrative analysis of small molecule transcriptional responses in the human malaria parasite Plasmodium falciparum

by Siwo, Geoffrey H., Smith, Roger S., Tan, Asako, Button-Simons, Katrina A., Checkley, Lisa A., Ferdig, Michael T.
Published 2015

High-throughput 454 resequencing for allele discovery and recombination mapping in Plasmodium falciparum

by Samarakoon, Upeka, Regier, Allison, Tan, Asako, Desany, Brian A, Collins, Brendan, Tan, John C, Emrich, Scott J, Ferdig, Michael T
Published 2011

Metabolic QTL Analysis Links Chloroquine Resistance in Plasmodium falciparum to Impaired Hemoglobin Catabolism

by Lewis, Ian A., Wacker, Mark, Olszewski, Kellen L., Cobbold, Simon A., Baska, Katelynn S., Tan, Asako, Ferdig, Michael T., Llinás, Manuel
Published 2014

A microarray platform and novel SNP calling algorithm to evaluate Plasmodium falciparum field samples of low DNA quantity

by Jacob, Christopher G, Tan, John C, Miller, Becky A, Tan, Asako, Takala-Harrison, Shannon, Ferdig, Michael T, Plowe, Christopher V
Published 2014

Predicting functional and regulatory divergence of a drug resistance transporter gene in the human malaria parasite

by Siwo, Geoffrey H, Tan, Asako, Button-Simons, Katrina A, Samarakoon, Upeka, Checkley, Lisa A, Pinapati, Richard S, Ferdig, Michael T
Published 2015

An optimized microarray platform for assaying genomic variation in Plasmodium falciparum field populations

by Tan, John C, Miller, Becky A, Tan, Asako, Patel, Jigar J, Cheeseman, Ian H, Anderson, Tim JC, Manske, Magnus, Maslen, Gareth, Kwiatkowski, Dominic P, Ferdig, Michael T
Published 2011

A Process Similar to Autophagy Is Associated with Cytocidal Chloroquine Resistance in Plasmodium falciparum

by Gaviria, David, Paguio, Michelle F., Turnbull, Lindsey B., Tan, Asako, Siriwardana, Amila, Ghosh, Debasish, Ferdig, Michael T., Sinai, Anthony P., Roepe, Paul D.
Published 2013

A HECT Ubiquitin-Protein Ligase as a Novel Candidate Gene for Altered Quinine and Quinidine Responses in Plasmodium falciparum

by Sanchez, Cecilia P., Liu, Chia-Hao, Mayer, Sybille, Nurhasanah, Astutiati, Cyrklaff, Marek, Mu, Jianbing, Ferdig, Michael T., Stein, Wilfred D., Lanzer, Michael
Published 2014

Functional Analysis of Sirtuin Genes in Multiple Plasmodium falciparum Strains

by Merrick, Catherine J., Jiang, Rays H. Y., Skillman, Kristen M., Samarakoon, Upeka, Moore, Rachel M., Dzikowski, Ron, Ferdig, Michael T., Duraisingh, Manoj T.
Published 2015

An Apicoplast Localized Ubiquitylation System Is Required for the Import of Nuclear-encoded Plastid Proteins

by Agrawal, Swati, Chung, Duk-Won D., Ponts, Nadia, van Dooren, Giel G., Prudhomme, Jacques, Brooks, Carrie F., Rodrigues, Elisadra M., Tan, John C., Ferdig, Michael T., Striepen, Boris, Le Roch, Karine G.
Published 2013

Plasmodium falciparum genetic crosses in a humanized mouse model

by Vaughan, Ashley M., Pinapati, Richard S., Cheeseman, Ian H., Camargo, Nelly, Fishbaugher, Matthew, Checkley, Lisa A., Nair, Shalini, Hutyra, Carolyn A., Nosten, François H., Anderson, Timothy J. C., Ferdig, Michael T., Kappe, Stefan H. I.
Published 2015

Chemogenomic profiling of Plasmodium falciparum as a tool to aid antimalarial drug discovery

by Pradhan, Anupam, Siwo, Geoffrey H., Singh, Naresh, Martens, Brian, Balu, Bharath, Button-Simons, Katrina A., Tan, Asako, Zhang, Min, Udenze, Kenneth O., Jiang, Rays H.Y., Ferdig, Michael T., Adams, John H., Kyle, Dennis E.
Published 2015

Population Structure Shapes Copy Number Variation in Malaria Parasites

by Cheeseman, Ian H., Miller, Becky, Tan, John C., Tan, Asako, Nair, Shalini, Nkhoma, Standwell C., De Donato, Marcos, Rodulfo, Hectorina, Dondorp, Arjen, Branch, Oralee H., Mesia, Lastenia Ruiz, Newton, Paul, Mayxay, Mayfong, Amambua-Ngwa, Alfred, Conway, David J., Nosten, François, Ferdig, Michael T., Anderson, Tim J. C.
Published 2016

Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

by Manske, Magnus, Miotto, Olivo, Campino, Susana, Auburn, Sarah, Almagro-Garcia, Jacob, Maslen, Gareth, O’Brien, Jack, Djimde, Abdoulaye, Doumbo, Ogobara, Zongo, Issaka, Ouedraogo, Jean-Bosco, Michon, Pascal, Mueller, Ivo, Siba, Peter, Nzila, Alexis, Borrmann, Steffen, Kiara, Steven M., Marsh, Kevin, Jiang, Hongying, Su, Xin-Zhuan, Amaratunga, Chanaki, Fairhurst, Rick, Socheat, Duong, Nosten, Francois, Imwong, Mallika, White, Nicholas J., Sanders, Mandy, Anastasi, Elisa, Alcock, Dan, Drury, Eleanor, Oyola, Samuel, Quail, Michael A., Turner, Daniel J., Rubio, Valentin Ruano, Jyothi, Dushyanth, Amenga-Etego, Lucas, Hubbart, Christina, Jeffreys, Anna, Rowlands, Kate, Sutherland, Colin, Roper, Cally, Mangano, Valentina, Modiano, David, Tan, John C., Ferdig, Michael T., Amambua-Ngwa, Alfred, Conway, David J., Takala-Harrison, Shannon, Plowe, Christopher V., Rayner, Julian C., Rockett, Kirk A., Clark, Taane G., Newbold, Chris I., Berriman, Matthew, MacInnis, Bronwyn, Kwiatkowski, Dominic P.
Published 2012

Open source drug discovery with the Malaria Box Compound collection for neglected diseases and beyond

by Phillips, Margaret A., Van Voorhis, Wesley C., Adams, John H., Adelfio, Roberto, Ahyong, Vida, Akabas, Myles H., Alano, Pietro, Alday, Aintzane, Alemán Resto, Yesmalie, Alsibaee, Aishah, Alzualde, Ainhoa, Andrews, Katherine T., Avery, Simon V., Avery, Vicky M., Ayong, Lawrence, Baker, Mark, Baker, Stephen, Ben Mamoun, Choukri, Bhatia, Sangeeta, Bickle, Quentin, Bounaadja, Lotfi, Bowling, Tana, Bosch, Jürgen, Boucher, Lauren E., Boyom, Fabrice F., Brea, Jose, Brennan, Marian, Burton, Audrey, Caffrey, Conor R., Camarda, Grazia, Carrasquilla, Manuela, Carter, Dee, Belen Cassera, Maria, Chih-Chien Cheng, Ken, Chindaudomsate, Worathad, Chubb, Anthony, Colon, Beatrice L., Colón-López, Daisy D., Corbett, Yolanda, Crowther, Gregory J., Cowan, Noemi, D’Alessandro, Sarah, Le Dang, Na, Delves, Michael, DeRisi, Joseph L., Du, Alan Y., Duffy, Sandra, Abd El-Salam El-Sayed, Shimaa, Ferdig, Michael T., Fernández Robledo, José A., Fidock, David A., Florent, Isabelle, Fokou, Patrick V. T., Galstian, Ani, Gamo, Francisco Javier, Gokool, Suzanne, Gold, Ben, Golub, Todd, Goldgof, Gregory M., Guha, Rajarshi, Guiguemde, W. Armand, Gural, Nil, Guy, R. Kiplin, Hansen, Michael A. E., Hanson, Kirsten K., Hemphill, Andrew, Hooft van Huijsduijnen, Rob, Horii, Takaaki, Horrocks, Paul, Hughes, Tyler B., Huston, Christopher, Igarashi, Ikuo, Ingram-Sieber, Katrin, Itoe, Maurice A., Jadhav, Ajit, Naranuntarat Jensen, Amornrat, Jensen, Laran T., Jiang, Rays H.Y., Kaiser, Annette, Keiser, Jennifer, Ketas, Thomas, Kicka, Sebastien, Kim, Sunyoung, Kirk, Kiaran, Kumar, Vidya P., Kyle, Dennis E., Lafuente, Maria Jose, Landfear, Scott, Lee, Nathan, Lee, Sukjun, Lehane, Adele M., Li, Fengwu, Little, David, Liu, Liqiong, Llinás, Manuel, Loza, Maria I., Lubar, Aristea, Lucantoni, Leonardo, Lucet, Isabelle, Maes, Louis, Mancama, Dalu, Mansour, Nuha R., March, Sandra, McGowan, Sheena, Medina Vera, Iset, Meister, Stephan, Mercer, Luke, Mestres, Jordi, Mfopa, Alvine N., Misra, Raj N., Moon, Seunghyun, Moore, John P., Morais Rodrigues da Costa, Francielly, Müller, Joachim, Muriana, Arantza, Nakazawa Hewitt, Stephen, Nare, Bakela, Nathan, Carl, Narraidoo, Nathalie, Nawaratna, Sujeevi, Ojo, Kayode K., Ortiz, Diana, Panic, Gordana, Papadatos, George, Parapini, Silvia, Patra, Kailash, Pham, Ngoc, Prats, Sarah, Plouffe, David M., Poulsen, Sally-Ann, Pradhan, Anupam, Quevedo, Celia, Quinn, Ronald J., Rice, Christopher A., Abdo Rizk, Mohamed, Ruecker, Andrea, St. Onge, Robert, Salgado Ferreira, Rafaela, Samra, Jasmeet, Robinett, Natalie G., Schlecht, Ulrich, Schmitt, Marjorie, Silva Villela, Filipe, Silvestrini, Francesco, Sinden, Robert, Smith, Dennis A., Soldati, Thierry, Spitzmüller, Andreas, Stamm, Serge Maximilian, Sullivan, David J., Sullivan, William, Suresh, Sundari, Suzuki, Brian M., Suzuki, Yo, Swamidass, S. Joshua, Taramelli, Donatella, Tchokouaha, Lauve R.Y., Theron, Anjo, Thomas, David, Tonissen, Kathryn F., Townson, Simon, Tripathi, Abhai K., Trofimov, Valentin, Udenze, Kenneth O., Ullah, Imran, Vallieres, Cindy, Vigil, Edgar, Vinetz, Joseph M., Voong Vinh, Phat, Vu, Hoan, Watanabe, Nao-aki, Weatherby, Kate, White, Pamela M., Wilks, Andrew F., Winzeler, Elizabeth A., Wojcik, Edward, Wree, Melanie, Wu, Wesley, Yokoyama, Naoaki, Zollo, Paul H. A., Abla, Nada, Blasco, Benjamin, Burrows, Jeremy, Laleu, Benoît, Leroy, Didier, Spangenberg, Thomas, Wells, Timothy, Willis, Paul A.
Published 2016