Single-cell ChIP-seq reveals cell subpopulations defined by chromatin state

by Rotem, Assaf, Ram, Oren, Shoresh, Noam, Sperling, Ralph A., Goren, Alon, Weitz, David A., Bernstein, Bradley E.
Published 2015

Fine Tuning of Globin Gene Expression by DNA Methylation

by Goren, Alon, Simchen, Giora, Fibach, Eitan, Szabo, Piroska E., Tanimoto, Keiji, Chakalova, Lyubomira, Pfeifer, Gerd P., Fraser, Peter J., Engel, James D., Cedar, Howard
Published 2006

Systematic comparison of monoclonal versus polyclonal antibodies for mapping histone modifications by ChIP-seq

by Busby, Michele, Xue, Catherine, Li, Catherine, Farjoun, Yossi, Gienger, Elizabeth, Yofe, Ido, Gladden, Adrianne, Epstein, Charles B., Cornett, Evan M., Rothbart, Scott B., Nusbaum, Chad, Goren, Alon
Published 2016

Oct1 and OCA-B are selectively required for CD4 memory T cell function

by Shakya, Arvind, Goren, Alon, Shalek, Alex, German, Cody N., Snook, Jeremy, Kuchroo, Vijay K., Yosef, Nir, Chan, Raymond C., Regev, Aviv, Williams, Matthew A., Tantin, Dean
Published 2015

Optimization of transcription factor binding map accuracy utilizing knockout-mouse models

by Krebs, Wolfgang, Schmidt, Susanne V., Goren, Alon, De Nardo, Dominic, Labzin, Larisa, Bovier, Anton, Ulas, Thomas, Theis, Heidi, Kraut, Michael, Latz, Eicke, Beyer, Marc, Schultze, Joachim L.
Published 2014

Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells

by Shalek, Alex K., Satija, Rahul, Adiconis, Xian, Gertner, Rona S., Gaublomme, Jellert T., Raychowdhury, Raktima, Schwartz, Schragi, Yosef, Nir, Malboeuf, Christine, Lu, Diana, Trombetta, John T., Gennert, Dave, Gnirke, Andreas, Goren, Alon, Hacohen, Nir, Levin, Joshua Z., Park, Hongkun, Regev, Aviv
Published 2013

Dissecting neural differentiation regulatory networks through epigenetic footprinting

by Ziller, Michael J., Edri, Reuven, Yaffe, Yakey, Donaghey, Julie, Pop, Ramona, Mallard, William, Issner, Robbyn, Gifford, Casey A., Goren, Alon, Xing, Jeff, Gu, Hongcang, Cachiarelli, Davide, Tsankov, Alexander, Epstein, Chuck, Rinn, John R., Mikkelsen, Tarjei S., Kohlbacher, Oliver, Gnirke, Andreas, Bernstein, Bradley E., Elkabetz, Yechiel, Meissner, Alexander
Published 2014

MYB-QKI rearrangements in Angiocentric Glioma drive tumorigenicity through a tripartite mechanism

by Bandopadhayay, Pratiti, Ramkissoon, Lori A., Jain, Payal, Bergthold, Guillaume, Wala, Jeremiah, Zeid, Rhamy, Schumacher, Steven E., Urbanski, Laura, O’Rourke, Ryan, Gibson, William J., Pelton, Kristine, Ramkissoon, Shakti H., Han, Harry J., Zhu, Yuankun, Choudhari, Namrata, Silva, Amanda, Boucher, Katie, Henn, Rosemary E., Kang, Yun Jee, Knoff, David, Paolella, Brenton R., Gladden-Young, Adrianne, Varlet, Pascale, Pages, Melanie, Horowitz, Peleg M., Federation, Alexander, Malkin, Hayley, Tracy, Adam, Seepo, Sara, Ducar, Matthew, Hummelen, Paul Van, Santi, Mariarita, Buccoliero, Anna Maria, Scagnet, Mirko, Bowers, Daniel C., Giannini, Caterina, Puget, Stephanie, Hawkins, Cynthia, Tabori, Uri, Klekner, Almos, Bognar, Laszlo, Burger, Peter C., Eberhart, Charles, Rodriguez, Fausto J., Hill, D. Ashley, Mueller, Sabine, Haas-Kogan, Daphne A., Phillips, Joanna J., Santagata, Sandro, Stiles, Charles D., Bradner, James E., Jabado, Nada, Goren, Alon, Grill, Jacques, Ligon, Azra H., Goumnerova, Liliana, Waanders, Angela J., Storm, Phillip B., Kieran, Mark W., Ligon, Keith L., Beroukhim, Rameen, Resnick, Adam C.
Published 2016