Evolution of allostery in the cyclic nucleotide binding module

by Kannan, Natarajan, Wu, Jian, Anand, Ganesh S, Yooseph, Shibu, Neuwald, Andrew F, Venter, J Craig, Taylor, Susan S
Published 2007

Structural and Functional Diversity of the Microbial Kinome

by Kannan, Natarajan, Taylor, Susan S, Zhai, Yufeng, Venter, J. Craig, Manning, Gerard
Published 2007

Stalking the Fourth Domain in Metagenomic Data: Searching for, Discovering, and Interpreting Novel, Deep Branches in Marker Gene Phylogenetic Trees

by Wu, Dongying, Wu, Martin, Halpern, Aaron, Rusch, Douglas B., Yooseph, Shibu, Frazier, Marvin, Venter, J. Craig, Eisen, Jonathan A.
Published 2011

Metagenomic Exploration of Viruses throughout the Indian Ocean

by Williamson, Shannon J., Allen, Lisa Zeigler, Lorenzi, Hernan A., Fadrosh, Douglas W., Brami, Daniel, Thiagarajan, Mathangi, McCrow, John P., Tovchigrechko, Andrey, Yooseph, Shibu, Venter, J. Craig
Published 2012

A robust ambient temperature collection and stabilization strategy: Enabling worldwide functional studies of the human microbiome

by Anderson, Ericka L., Li, Weizhong, Klitgord, Niels, Highlander, Sarah K., Dayrit, Mark, Seguritan, Victor, Yooseph, Shibu, Biggs, William, Venter, J. Craig, Nelson, Karen E., Jones, Marcus B.
Published 2016

Rescue of mutant fitness defects using in vitro reconstituted designer transposons in Mycoplasma mycoides

by Karas, Bogumil J., Wise, Kim S., Sun, Lijie, Venter, J. Craig, Glass, John I., Hutchison, Clyde A., Smith, Hamilton O., Suzuki, Yo
Published 2014

Survey Sequencing and Comparative Analysis of the Elephant Shark (Callorhinchus milii) Genome

by Venkatesh, Byrappa, Kirkness, Ewen F, Loh, Yong-Hwee, Halpern, Aaron L, Lee, Alison P, Johnson, Justin, Dandona, Nidhi, Viswanathan, Lakshmi D, Tay, Alice, Venter, J. Craig, Strausberg, Robert L, Brenner, Sydney
Published 2007

The Sorcerer II Global Ocean Sampling Expedition: Metagenomic Characterization of Viruses within Aquatic Microbial Samples

by Williamson, Shannon J., Rusch, Douglas B., Yooseph, Shibu, Halpern, Aaron L., Heidelberg, Karla B., Glass, John I., Andrews-Pfannkoch, Cynthia, Fadrosh, Douglas, Miller, Christopher S., Sutton, Granger, Frazier, Marvin, Venter, J. Craig
Published 2008

Influence of nutrients and currents on the genomic composition of microbes across an upwelling mosaic

by Allen, Lisa Zeigler, Allen, Eric E, Badger, Jonathan H, McCrow, John P, Paulsen, Ian T, Elbourne, Liam DH, Thiagarajan, Mathangi, Rusch, Doug B, Nealson, Kenneth H, Williamson, Shannon J, Venter, J Craig, Allen, Andrew E
Published 2012

A Metagenomic Framework for the Study of Airborne Microbial Communities

by Yooseph, Shibu, Andrews-Pfannkoch, Cynthia, Tenney, Aaron, McQuaid, Jeff, Williamson, Shannon, Thiagarajan, Mathangi, Brami, Daniel, Zeigler-Allen, Lisa, Hoffman, Jeff, Goll, Johannes B., Fadrosh, Douglas, Glass, John, Adams, Mark D., Friedman, Robert, Venter, J. Craig
Published 2013

One step engineering of the small-subunit ribosomal RNA using CRISPR/Cas9

by Kannan, Krishna, Tsvetanova, Billyana, Chuang, Ray-Yuan, Noskov, Vladimir N., Assad-Garcia, Nacyra, Ma, Li, Hutchison III, Clyde A., Smith, Hamilton O., Glass, John I., Merryman, Chuck, Venter, J. Craig, Gibson, Daniel G.
Published 2016

Sequence analysis of a complete 1.66 Mb Prochlorococcus marinus MED4 genome cloned in yeast

by Tagwerker, Christian, Dupont, Christopher L., Karas, Bogumil J., Ma, Li, Chuang, Ray-Yuan, Benders, Gwynedd A., Ramon, Adi, Novotny, Mark, Montague, Michael G., Venepally, Pratap, Brami, Daniel, Schwartz, Ariel, Andrews-Pfannkoch, Cynthia, Gibson, Daniel G., Glass, John I., Smith, Hamilton O., Venter, J. Craig, Hutchison, Clyde A.
Published 2012

Assembly of eukaryotic algal chromosomes in yeast

by Karas, Bogumil J, Molparia, Bhuvan, Jablanovic, Jelena, Hermann, Wolfgang J, Lin, Ying-Chi, Dupont, Christopher L, Tagwerker, Christian, Yonemoto, Isaac T, Noskov, Vladimir N, Chuang, Ray-Yuan, Allen, Andrew E, Glass, John I, Hutchison, Clyde A, Smith, Hamilton O, Venter, J Craig, Weyman, Philip D
Published 2013

Designer diatom episomes delivered by bacterial conjugation

by Karas, Bogumil J., Diner, Rachel E., Lefebvre, Stephane C., McQuaid, Jeff, Phillips, Alex P.R., Noddings, Chari M., Brunson, John K., Valas, Ruben E., Deerinck, Thomas J., Jablanovic, Jelena, Gillard, Jeroen T.F., Beeri, Karen, Ellisman, Mark H., Glass, John I., Hutchison III, Clyde A., Smith, Hamilton O., Venter, J. Craig, Allen, Andrew E., Dupont, Christopher L., Weyman, Philip D.
Published 2015

The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families

by Yooseph, Shibu, Sutton, Granger, Rusch, Douglas B, Halpern, Aaron L, Williamson, Shannon J, Remington, Karin, Eisen, Jonathan A, Heidelberg, Karla B, Manning, Gerard, Li, Weizhong, Jaroszewski, Lukasz, Cieplak, Piotr, Miller, Christopher S, Li, Huiying, Mashiyama, Susan T, Joachimiak, Marcin P, van Belle, Christopher, Chandonia, John-Marc, Soergel, David A, Zhai, Yufeng, Natarajan, Kannan, Lee, Shaun, Raphael, Benjamin J, Bafna, Vineet, Friedman, Robert, Brenner, Steven E, Godzik, Adam, Eisenberg, David, Dixon, Jack E, Taylor, Susan S, Strausberg, Robert L, Frazier, Marvin, Venter, J. Craig
Published 2007

The Diploid Genome Sequence of an Individual Human

by Levy, Samuel, Sutton, Granger, Ng, Pauline C, Feuk, Lars, Halpern, Aaron L, Walenz, Brian P, Axelrod, Nelson, Huang, Jiaqi, Kirkness, Ewen F, Denisov, Gennady, Lin, Yuan, MacDonald, Jeffrey R, Pang, Andy Wing Chun, Shago, Mary, Stockwell, Timothy B, Tsiamouri, Alexia, Bafna, Vineet, Bansal, Vikas, Kravitz, Saul A, Busam, Dana A, Beeson, Karen Y, McIntosh, Tina C, Remington, Karin A, Abril, Josep F, Gill, John, Borman, Jon, Rogers, Yu-Hui, Frazier, Marvin E, Scherer, Stephen W, Strausberg, Robert L, Venter, J. Craig
Published 2007

Functional Tradeoffs Underpin Salinity-Driven Divergence in Microbial Community Composition

by Dupont, Chris L., Larsson, John, Yooseph, Shibu, Ininbergs, Karolina, Goll, Johannes, Asplund-Samuelsson, Johannes, McCrow, John P., Celepli, Narin, Allen, Lisa Zeigler, Ekman, Martin, Lucas, Andrew J., Hagström, Åke, Thiagarajan, Mathangi, Brindefalk, Björn, Richter, Alexander R., Andersson, Anders F., Tenney, Aaron, Lundin, Daniel, Tovchigrechko, Andrey, Nylander, Johan A. A., Brami, Daniel, Badger, Jonathan H., Allen, Andrew E., Rusch, Douglas B., Hoffman, Jeff, Norrby, Erling, Friedman, Robert, Pinhassi, Jarone, Venter, J. Craig, Bergman, Birgitta
Published 2014

Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus

by Fedorova, Natalie D., Khaldi, Nora, Joardar, Vinita S., Maiti, Rama, Amedeo, Paolo, Anderson, Michael J., Crabtree, Jonathan, Silva, Joana C., Badger, Jonathan H., Albarraq, Ahmed, Angiuoli, Sam, Bussey, Howard, Bowyer, Paul, Cotty, Peter J., Dyer, Paul S., Egan, Amy, Galens, Kevin, Fraser-Liggett, Claire M., Haas, Brian J., Inman, Jason M., Kent, Richard, Lemieux, Sebastien, Malavazi, Iran, Orvis, Joshua, Roemer, Terry, Ronning, Catherine M., Sundaram, Jaideep P., Sutton, Granger, Turner, Geoff, Venter, J. Craig, White, Owen R., Whitty, Brett R., Youngman, Phil, Wolfe, Kenneth H., Goldman, Gustavo H., Wortman, Jennifer R., Jiang, Bo, Denning, David W., Nierman, William C.
Published 2008

The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific

by Rusch, Douglas B, Halpern, Aaron L, Sutton, Granger, Heidelberg, Karla B, Williamson, Shannon, Yooseph, Shibu, Wu, Dongying, Eisen, Jonathan A, Hoffman, Jeff M, Remington, Karin, Beeson, Karen, Tran, Bao, Smith, Hamilton, Baden-Tillson, Holly, Stewart, Clare, Thorpe, Joyce, Freeman, Jason, Andrews-Pfannkoch, Cynthia, Venter, Joseph E, Li, Kelvin, Kravitz, Saul, Heidelberg, John F, Utterback, Terry, Rogers, Yu-Hui, Falcón, Luisa I, Souza, Valeria, Bonilla-Rosso, Germán, Eguiarte, Luis E, Karl, David M, Sathyendranath, Shubha, Platt, Trevor, Bermingham, Eldredge, Gallardo, Victor, Tamayo-Castillo, Giselle, Ferrari, Michael R, Strausberg, Robert L, Nealson, Kenneth, Friedman, Robert, Frazier, Marvin, Venter, J. Craig
Published 2007