Dealing with Data: A Case Study on Information and Data Management Literacy

by Haendel, Melissa A., Vasilevsky, Nicole A., Wirz, Jacqueline A.
Published 2012

Uberon, an integrative multi-species anatomy ontology

by Mungall, Christopher J, Torniai, Carlo, Gkoutos, Georgios V, Lewis, Suzanna E, Haendel, Melissa A
Published 2012

The zebrafish anatomy and stage ontologies: representing the anatomy and development of Danio rerio

by Van Slyke, Ceri E, Bradford, Yvonne M, Westerfield, Monte, Haendel, Melissa A
Published 2014

On the reproducibility of science: unique identification of research resources in the biomedical literature

by Vasilevsky, Nicole A., Brush, Matthew H., Paddock, Holly, Ponting, Laura, Tripathy, Shreejoy J., LaRocca, Gregory M., Haendel, Melissa A.
Published 2013

Ontology based molecular signatures for immune cell types via gene expression analysis

by Meehan, Terrence F, Vasilevsky, Nicole A, Mungall, Christopher J, Dougall, David S, Haendel, Melissa A, Blake, Judith A, Diehl, Alexander D
Published 2013

Nose to tail, roots to shoots: spatial descriptors for phenotypic diversity in the Biological Spatial Ontology

by Dahdul, Wasila M, Cui, Hong, Mabee, Paula M, Mungall, Christopher J, Osumi-Sutherland, David, Walls, Ramona L, Haendel, Melissa A
Published 2014

The Porifera Ontology (PORO): enhancing sponge systematics with an anatomy ontology

by Thacker, Robert W, Díaz, Maria Cristina, Kerner, Adeline, Vignes-Lebbe, Régine, Segerdell, Erik, Haendel, Melissa A, Mungall, Christopher J
Published 2014

Disease insights through cross-species phenotype comparisons

by Haendel, Melissa A., Vasilevsky, Nicole, Brush, Matthew, Hochheiser, Harry S., Jacobsen, Julius, Oellrich, Anika, Mungall, Christopher J., Washington, Nicole, Köhler, Sebastian, Lewis, Suzanna E., Robinson, Peter N., Smedley, Damian
Published 2015

The Resource Identification Initiative: A cultural shift in publishing

by Bandrowski, Anita, Brush, Matthew, Grethe, Jeffery S., Haendel, Melissa A, Kennedy, David N., Hill, Sean, Hof, Patrick R., Martone, Maryann E., Pols, Maaike, Tan, Serena C., Washington, Nicole, Zudilova‐Seinstra, Elena, Vasilevsky, Nicole
Published 2016

The Resource Identification Initiative: A cultural shift in publishing

by Bandrowski, Anita, Brush, Matthew, Grethe, Jeffery S., Haendel, Melissa A., Kennedy, David N., Hill, Sean, Hof, Patrick R., Martone, Maryann E., Pols, Maaike, Tan, Serena, Washington, Nicole, Zudilova-Seinstra, Elena, Vasilevsky, Nicole
Published 2015

The Resource Identification Initiative: a cultural shift in publishing

by Bandrowski, Anita, Brush, Matthew, Grethe, Jeffery S., Haendel, Melissa A., Kennedy, David N., Hill, Sean, Hof, Patrick R., Martone, Maryann E., Pols, Maaike, Tan, Serena C., Washington, Nicole, Zudilova‐Seinstra, Elena, Vasilevsky, Nicole
Published 2015

A Unified Anatomy Ontology of the Vertebrate Skeletal System

by Dahdul, Wasila M., Balhoff, James P., Blackburn, David C., Diehl, Alexander D., Haendel, Melissa A., Hall, Brian K., Lapp, Hilmar, Lundberg, John G., Mungall, Christopher J., Ringwald, Martin, Segerdell, Erik, Van Slyke, Ceri E., Vickaryous, Matthew K., Westerfield, Monte, Mabee, Paula M.
Published 2012

Distributed Cognition and Process Management Enabling Individualized Translational Research: The NIH Undiagnosed Diseases Program Experience

by Links, Amanda E., Draper, David, Lee, Elizabeth, Guzman, Jessica, Valivullah, Zaheer, Maduro, Valerie, Lebedev, Vlad, Didenko, Maxim, Tomlin, Garrick, Brudno, Michael, Girdea, Marta, Dumitriu, Sergiu, Haendel, Melissa A., Mungall, Christopher J., Smedley, Damian, Hochheiser, Harry, Arnold, Andrew M., Coessens, Bert, Verhoeven, Steven, Bone, William, Adams, David, Boerkoel, Cornelius F., Gahl, William A., Sincan, Murat
Published 2016

Muscle Logic: New Knowledge Resource for Anatomy Enables Comprehensive Searches of the Literature on the Feeding Muscles of Mammals

by Druzinsky, Robert E., Balhoff, James P., Crompton, Alfred W., Done, James, German, Rebecca Z., Haendel, Melissa A., Herrel, Anthony, Herring, Susan W., Lapp, Hilmar, Mabee, Paula M., Muller, Hans-Michael, Mungall, Christopher J., Sternberg, Paul W., Van Auken, Kimberly, Vinyard, Christopher J., Williams, Susan H., Wall, Christine E.
Published 2016

Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon

by Haendel, Melissa A, Balhoff, James P, Bastian, Frederic B, Blackburn, David C, Blake, Judith A, Bradford, Yvonne, Comte, Aurelie, Dahdul, Wasila M, Dececchi, Thomas A, Druzinsky, Robert E, Hayamizu, Terry F, Ibrahim, Nizar, Lewis, Suzanna E, Mabee, Paula M, Niknejad, Anne, Robinson-Rechavi, Marc, Sereno, Paul C, Mungall, Christopher J
Published 2014

CLO: The cell line ontology

by Sarntivijai, Sirarat, Lin, Yu, Xiang, Zuoshuang, Meehan, Terrence F, Diehl, Alexander D, Vempati, Uma D, Schürer, Stephan C, Pang, Chao, Malone, James, Parkinson, Helen, Liu, Yue, Takatsuki, Terue, Saijo, Kaoru, Masuya, Hiroshi, Nakamura, Yukio, Brush, Matthew H, Haendel, Melissa A, Zheng, Jie, Stoeckert, Christian J, Peters, Bjoern, Mungall, Christopher J, Carey, Thomas E, States, David J, Athey, Brian D, He, Yongqun
Published 2014

The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability

by Diehl, Alexander D., Meehan, Terrence F., Bradford, Yvonne M., Brush, Matthew H., Dahdul, Wasila M., Dougall, David S., He, Yongqun, Osumi-Sutherland, David, Ruttenberg, Alan, Sarntivijai, Sirarat, Van Slyke, Ceri E., Vasilevsky, Nicole A., Haendel, Melissa A., Blake, Judith A., Mungall, Christopher J.
Published 2016

Computational evaluation of exome sequence data using human and model organism phenotypes improves diagnostic efficiency

by Bone, William P., Washington, Nicole L., Buske, Orion J., Adams, David R., Davis, Joie, Draper, David, Flynn, Elise D., Girdea, Marta, Godfrey, Rena, Golas, Gretchen, Groden, Catherine, Jacobsen, Julius, Köhler, Sebastian, Lee, Elizabeth M. J., Links, Amanda E., Markello, Thomas C., Mungall, Christopher J., Nehrebecky, Michele, Robinson, Peter N., Sincan, Murat, Soldatos, Ariane G., Tifft, Cynthia J., Toro, Camilo, Trang, Heather, Valkanas, Elise, Vasilevsky, Nicole, Wahl, Colleen, Wolfe, Lynne A., Boerkoel, Cornelius F., Brudno, Michael, Haendel, Melissa A., Gahl, William A., Smedley, Damian
Published 2016

The Ontology for Biomedical Investigations

by Bandrowski, Anita, Brinkman, Ryan, Brochhausen, Mathias, Brush, Matthew H., Bug, Bill, Chibucos, Marcus C., Clancy, Kevin, Courtot, Mélanie, Derom, Dirk, Dumontier, Michel, Fan, Liju, Fostel, Jennifer, Fragoso, Gilberto, Gibson, Frank, Gonzalez-Beltran, Alejandra, Haendel, Melissa A., He, Yongqun, Heiskanen, Mervi, Hernandez-Boussard, Tina, Jensen, Mark, Lin, Yu, Lister, Allyson L., Lord, Phillip, Malone, James, Manduchi, Elisabetta, McGee, Monnie, Morrison, Norman, Overton, James A., Parkinson, Helen, Peters, Bjoern, Rocca-Serra, Philippe, Ruttenberg, Alan, Sansone, Susanna-Assunta, Scheuermann, Richard H., Schober, Daniel, Smith, Barry, Soldatova, Larisa N., Stoeckert, Christian J., Taylor, Chris F., Torniai, Carlo, Turner, Jessica A., Vita, Randi, Whetzel, Patricia L., Zheng, Jie
Published 2016