Draft Genome Sequence of the Fish Pathogen Piscirickettsia salmonis

by Eppinger, Mark, McNair, Katelyn, Zogaj, Xhavit, Dinsdale, Elizabeth A., Edwards, Robert A., Klose, Karl E.
Published 2013

Escherichia coli O157:H7 strains harbor at least three distinct sequence types of Shiga toxin 2a-converting phages

by Yin, Shuang, Rusconi, Brigida, Sanjar, Fatemeh, Goswami, Kakolie, Xiaoli, Lingzi, Eppinger, Mark, Dudley, Edward G.
Published 2015

Genome Sequence of Bacillus thuringiensis Strain Btm27, an Egyptian Isolate Highly Toxic to Cotton Leafworm

by Rusconi, Brigida, Chen, Yue, Koenig, Sara S. K., El-Helow, Ehab R., Eppinger, Mark
Published 2015

Whole Genome Sequencing for Genomics-Guided Investigations of Escherichia coli O157:H7 Outbreaks

by Rusconi, Brigida, Sanjar, Fatemeh, Koenig, Sara S. K., Mammel, Mark K., Tarr, Phillip I., Eppinger, Mark
Published 2016

Novel Plasmids and Resistance Phenotypes in Yersinia pestis: Unique Plasmid Inventory of Strain Java 9 Mediates High Levels of Arsenic Resistance

by Eppinger, Mark, Radnedge, Lyndsay, Andersen, Gary, Vietri, Nicholas, Severson, Grant, Mou, Sherry, Ravel, Jacques, Worsham, Patricia L.
Published 2012

Genome Sequences of Five Clinical Isolates of Klebsiella pneumoniae

by Lopez, L. Letti, Rusconi, Brigida, Gildersleeve, Heidi, Qi, Chao, McLaughlin, Milena, Scheetz, Marc H., Seshu, J., Eppinger, Mark
Published 2016

Who Ate Whom? Adaptive Helicobacter Genomic Changes That Accompanied a Host Jump from Early Humans to Large Felines

by Eppinger, Mark, Baar, Claudia, Linz, Bodo, Raddatz, Günter, Lanz, Christa, Keller, Heike, Morelli, Giovanna, Gressmann, Helga, Achtman, Mark, Schuster, Stephan C
Published 2006

Yersinia pestis Evolution on a Small Timescale: Comparison of Whole Genome Sequences from North America

by Auerbach, Raymond K., Tuanyok, Apichai, Probert, William S., Kenefic, Leo, Vogler, Amy J., Bruce, David C., Munk, Christine, Brettin, Thomas S., Eppinger, Mark, Ravel, Jacques, Wagner, David M., Keim, Paul
Published 2007

The Complete Genome Sequence of Yersinia pseudotuberculosis IP31758, the Causative Agent of Far East Scarlet-Like Fever

by Eppinger, Mark, Rosovitz, M. J, Fricke, Wolfgang Florian, Rasko, David A, Kokorina, Galina, Fayolle, Corinne, Lindler, Luther E, Carniel, Elisabeth, Ravel, Jacques
Published 2007

Genome Sequences of Four Acinetobacter baumannii-A. calcoaceticus Complex Isolates from Combat-Related Infections Sustained in the Middle East

by Ketter, Patrick, Guentzel, M. Neal, Chambers, James P., Jorgensen, James, Murray, Clinton K., Cap, Andrew P., Yu, Jieh-Juen, Eppinger, Mark, Arulanandam, Bernard P.
Published 2014

Phylogeography and Molecular Epidemiology of Yersinia pestis in Madagascar

by Vogler, Amy J., Chan, Fabien, Wagner, David M., Roumagnac, Philippe, Lee, Judy, Nera, Roxanne, Eppinger, Mark, Ravel, Jacques, Rahalison, Lila, Rasoamanana, Bruno W., Beckstrom-Sternberg, Stephen M., Achtman, Mark, Chanteau, Suzanne, Keim, Paul
Published 2011

Whole-Genome Draft Sequences of 26 Enterohemorrhagic Escherichia coli O157:H7 Strains

by Eppinger, Mark, Daugherty, Sean, Agrawal, Sonia, Galens, Kevin, Sengamalay, Naomi, Sadzewicz, Lisa, Tallon, Luke, Cebula, Thomas A., Mammel, Mark K., Feng, Peter, Soderlund, Robert, Tarr, Phillip I., DebRoy, Chitrita, Dudley, Edward G., Fraser, Claire M., Ravel, Jacques
Published 2013

Phylogenetic Diversity of Vibrio cholerae Associated with Endemic Cholera in Mexico from 1991 to 2008

by Choi, Seon Young, Rashed, Shah M., Hasan, Nur A., Alam, Munirul, Islam, Tarequl, Sadique, Abdus, Johura, Fatema-Tuz, Eppinger, Mark, Ravel, Jacques, Huq, Anwar, Cravioto, Alejandro, Colwell, Rita R.
Published 2016

Genomic Epidemiology of the Haitian Cholera Outbreak: a Single Introduction Followed by Rapid, Extensive, and Continued Spread Characterized the Onset of the Epidemic

by Eppinger, Mark, Pearson, Talima, Koenig, Sara S. K., Pearson, Ofori, Hicks, Nathan, Agrawal, Sonia, Sanjar, Fatemeh, Galens, Kevin, Daugherty, Sean, Crabtree, Jonathan, Hendriksen, Rene S., Price, Lance B., Upadhyay, Bishnu P., Shakya, Geeta, Fraser, Claire M., Ravel, Jacques, Keim, Paul S.
Published 2014

Multiple Antimicrobial Resistance in Plague: An Emerging Public Health Risk

by Welch, Timothy J., Fricke, W. Florian, McDermott, Patrick F., White, David G., Rosso, Marie-Laure, Rasko, David A., Mammel, Mark K., Eppinger, Mark, Rosovitz, M.J., Wagner, David, Rahalison, Lila, LeClerc, J. Eugene, Hinshaw, Jeffrey M., Lindler, Luther E., Cebula, Thomas A., Carniel, Elisabeth, Ravel, Jacques
Published 2007

Genome Sequence of Escherichia coli O157:H7 Strain 2886-75, Associated with the First Reported Case of Human Infection in the United States

by Sanjar, Fatemeh, Hazen, Tracy H., Shah, Sadiq M., Koenig, Sara S. K., Agrawal, Sonia, Daugherty, Sean, Sadzewicz, Lisa, Tallon, Luke J., Mammel, Mark K., Feng, Peter, Soderlund, Robert, Tarr, Phillip I., DebRoy, Chitrita, Dudley, Edward G., Cebula, Thomas A., Ravel, Jacques, Fraser, Claire M., Rasko, David A., Eppinger, Mark
Published 2014

Phylogeography of Bacillus anthracis in the Country of Georgia Shows Evidence of Population Structuring and Is Dissimilar to Other Regional Genotypes

by Khmaladze, Ekaterine, Birdsell, Dawn N., Naumann, Amber A., Hochhalter, Christian B., Seymour, Meagan L., Nottingham, Roxanne, Beckstrom-Sternberg, Stephen M., Beckstrom-Sternberg, James, Nikolich, Mikeljon P., Chanturia, Gvantsa, Zhgenti, Ekaterine, Zakalashvili, Mariam, Malania, Lile, Babuadze, Giorgi, Tsertsvadze, Nikoloz, Abazashvili, Natalia, Kekelidze, Merab, Tsanava, Shota, Imnadze, Paata, Ganz, Holly H., Getz, Wayne M., Pearson, Ofori, Gajer, Pawel, Eppinger, Mark, Ravel, Jacques, Wagner, David M., Okinaka, Richard T., Schupp, James M., Keim, Paul, Pearson, Talima
Published 2014

Standardized Metadata for Human Pathogen/Vector Genomic Sequences

by Dugan, Vivien G., Emrich, Scott J., Giraldo-Calderón, Gloria I., Harb, Omar S., Newman, Ruchi M., Pickett, Brett E., Schriml, Lynn M., Stockwell, Timothy B., Stoeckert, Christian J., Sullivan, Dan E., Singh, Indresh, Ward, Doyle V., Yao, Alison, Zheng, Jie, Barrett, Tanya, Birren, Bruce, Brinkac, Lauren, Bruno, Vincent M., Caler, Elizabet, Chapman, Sinéad, Collins, Frank H., Cuomo, Christina A., Di Francesco, Valentina, Durkin, Scott, Eppinger, Mark, Feldgarden, Michael, Fraser, Claire, Fricke, W. Florian, Giovanni, Maria, Henn, Matthew R., Hine, Erin, Hotopp, Julie Dunning, Karsch-Mizrachi, Ilene, Kissinger, Jessica C., Lee, Eun Mi, Mathur, Punam, Mongodin, Emmanuel F., Murphy, Cheryl I., Myers, Garry, Neafsey, Daniel E., Nelson, Karen E., Nierman, William C., Puzak, Julia, Rasko, David, Roos, David S., Sadzewicz, Lisa, Silva, Joana C., Sobral, Bruno, Squires, R. Burke, Stevens, Rick L., Tallon, Luke, Tettelin, Herve, Wentworth, David, White, Owen, Will, Rebecca, Wortman, Jennifer, Zhang, Yun, Scheuermann, Richard H.
Published 2014