The Landscape of Human Proteins Interacting with Viruses and Other Pathogens

by Dyer, Matthew D, Murali, T. M, Sobral, Bruno W
Published 2008

Toxicogenomics through the eyes of informatics: conference overview and recommendations.

by Olden, Kenneth, Call, Neysa, Sobral, Bruno, Oakes, Robin
Published 2004

A Quantitative Study of the Division Cycle of Caulobacter crescentus Stalked Cells

by Li, Shenghua, Brazhnik, Paul, Sobral, Bruno, Tyson, John J
Published 2008

Selection of a phylogenetically informative region of the norovirus genome for outbreak linkage

by Verhoef, Linda, Williams, Kelly P., Kroneman, Annelies, Sobral, Bruno, van Pelt, Wilfrid, Koopmans, Marion
Published 2011

Bacterial DNA Sifted from the Trichoplax adhaerens (Animalia: Placozoa) Genome Project Reveals a Putative Rickettsial Endosymbiont

by Driscoll, Timothy, Gillespie, Joseph J., Nordberg, Eric K., Azad, Abdu F., Sobral, Bruno W.
Published 2013

Differential Stress Transcriptome Landscape of Historic and Recently Emerged Hypervirulent Strains of Clostridium difficile Strains Determined Using RNA-seq

by Scaria, Joy, Mao, Chunhong, Chen, Jenn-Wei, McDonough, Sean P., Sobral, Bruno, Chang, Yung-Fu
Published 2013

Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011

by Pyysalo, Sampo, Ohta, Tomoko, Rak, Rafal, Sullivan, Dan, Mao, Chunhong, Wang, Chunxia, Sobral, Bruno, Tsujii, Jun'ichi, Ananiadou, Sophia
Published 2012

Curation, integration and visualization of bacterial virulence factors in PATRIC

by Mao, Chunhong, Abraham, David, Wattam, Alice R., Wilson, Meredith J.C., Shukla, Maulik, Yoo, Hyun Seung, Sobral, Bruno W.
Published 2015

Plasmids and Rickettsial Evolution: Insight from Rickettsia felis

by Gillespie, Joseph J., Beier, Magda S., Rahman, M. Sayeedur, Ammerman, Nicole C., Shallom, Joshua M., Purkayastha, Anjan, Sobral, Bruno S., Azad, Abdu F.
Published 2007

Named Entity Recognition for Bacterial Type IV Secretion Systems

by Ananiadou, Sophia, Sullivan, Dan, Black, William, Levow, Gina-Anne, Gillespie, Joseph J., Mao, Chunhong, Pyysalo, Sampo, Kolluru, BalaKrishna, Tsujii, Junichi, Sobral, Bruno
Published 2011

Helicobacter pylori Colonization Ameliorates Glucose Homeostasis in Mice through a PPAR γ-Dependent Mechanism

by Bassaganya-Riera, Josep, Dominguez-Bello, Maria Gloria, Kronsteiner, Barbara, Carbo, Adria, Lu, Pinyi, Viladomiu, Monica, Pedragosa, Mireia, Zhang, Xiaoying, Sobral, Bruno W., Mane, Shrinivasrao P., Mohapatra, Saroj K., Horne, William T., Guri, Amir J., Groeschl, Michael, Lopez-Velasco, Gabriela, Hontecillas, Raquel
Published 2012

Comparative Genomics of Early-Diverging Brucella Strains Reveals a Novel Lipopolysaccharide Biosynthesis Pathway

by Wattam, Alice R., Inzana, Thomas J., Williams, Kelly P., Mane, Shrinivasrao P., Shukla, Maulik, Almeida, Nalvo F., Dickerman, Allan W., Mason, Steven, Moriyón, Ignacio, O’Callaghan, David, Whatmore, Adrian M., Sobral, Bruno W., Tiller, Rebekah V., Hoffmaster, Alex R., Frace, Michael A., De Castro, Cristina, Molinaro, Antonio, Boyle, Stephen M., De, Barun K., Setubal, João C.
Published 2012

The Condition-Dependent Transcriptional Landscape of Burkholderia pseudomallei

by Ooi, Wen Fong, Ong, Catherine, Nandi, Tannistha, Kreisberg, Jason F., Chua, Hui Hoon, Sun, Guangwen, Chen, Yahua, Mueller, Claudia, Conejero, Laura, Eshaghi, Majid, Ang, Roy Moh Lik, Liu, Jianhua, Sobral, Bruno W., Korbsrisate, Sunee, Gan, Yunn Hwen, Titball, Richard W., Bancroft, Gregory J., Valade, Eric, Tan, Patrick
Published 2013

Comparative Genomics of Early-Diverging Brucella Strains Reveals a Novel Lipopolysaccharide Biosynthesis Pathway

by Wattam, Alice R., Inzana, Thomas J., Williams, Kelly P., Mane, Shrinivasrao P., Shukla, Maulik, Almeida, Nalvo F., Dickerman, Allan W., Mason, Steven, Moriyón, Ignacio, O'Callaghan, David, Whatmore, Adrian M., Sobral, Bruno W., Tiller, Rebekah V., Hoffmaster, Alex R., Frace, Michael A., De Castro, Cristina, Molinaro, Antonio, Boyle, Stephen M., De, Barun K., Setubal, João C.
Published 2012

RNA-Rocket: an RNA-Seq analysis resource for infectious disease research

by Warren, Andrew S., Aurrecoechea, Cristina, Brunk, Brian, Desai, Prerak, Emrich, Scott, Giraldo-Calderón, Gloria I., Harb, Omar, Hix, Deborah, Lawson, Daniel, Machi, Dustin, Mao, Chunhong, McClelland, Michael, Nordberg, Eric, Shukla, Maulik, Vosshall, Leslie B., Wattam, Alice R., Will, Rebecca, Yoo, Hyun Seung, Sobral, Bruno
Published 2015

PATRIC, the bacterial bioinformatics database and analysis resource

by Wattam, Alice R., Abraham, David, Dalay, Oral, Disz, Terry L., Driscoll, Timothy, Gabbard, Joseph L., Gillespie, Joseph J., Gough, Roger, Hix, Deborah, Kenyon, Ronald, Machi, Dustin, Mao, Chunhong, Nordberg, Eric K., Olson, Robert, Overbeek, Ross, Pusch, Gordon D., Shukla, Maulik, Schulman, Julie, Stevens, Rick L., Sullivan, Daniel E., Vonstein, Veronika, Warren, Andrew, Will, Rebecca, Wilson, Meredith J.C., Yoo, Hyun Seung, Zhang, Chengdong, Zhang, Yan, Sobral, Bruno W.
Published 2014

Standardized Metadata for Human Pathogen/Vector Genomic Sequences

by Dugan, Vivien G., Emrich, Scott J., Giraldo-Calderón, Gloria I., Harb, Omar S., Newman, Ruchi M., Pickett, Brett E., Schriml, Lynn M., Stockwell, Timothy B., Stoeckert, Christian J., Sullivan, Dan E., Singh, Indresh, Ward, Doyle V., Yao, Alison, Zheng, Jie, Barrett, Tanya, Birren, Bruce, Brinkac, Lauren, Bruno, Vincent M., Caler, Elizabet, Chapman, Sinéad, Collins, Frank H., Cuomo, Christina A., Di Francesco, Valentina, Durkin, Scott, Eppinger, Mark, Feldgarden, Michael, Fraser, Claire, Fricke, W. Florian, Giovanni, Maria, Henn, Matthew R., Hine, Erin, Hotopp, Julie Dunning, Karsch-Mizrachi, Ilene, Kissinger, Jessica C., Lee, Eun Mi, Mathur, Punam, Mongodin, Emmanuel F., Murphy, Cheryl I., Myers, Garry, Neafsey, Daniel E., Nelson, Karen E., Nierman, William C., Puzak, Julia, Rasko, David, Roos, David S., Sadzewicz, Lisa, Silva, Joana C., Sobral, Bruno, Squires, R. Burke, Stevens, Rick L., Tallon, Luke, Tettelin, Herve, Wentworth, David, White, Owen, Will, Rebecca, Wortman, Jennifer, Zhang, Yun, Scheuermann, Richard H.
Published 2014