Gene network inference by fusing data from diverse distributions

by Žitnik, Marinka, Zupan, Blaž
Published 2015

Jumping across biomedical contexts using compressive data fusion

by Zitnik, Marinka, Zupan, Blaz
Published 2016

Gene network inference by probabilistic scoring of relationships from a factorized model of interactions

by Žitnik, Marinka, Zupan, Blaž
Published 2014

SNPsyn: detection and exploration of SNP–SNP interactions

by Curk, Tomaz, Rot, Gregor, Zupan, Blaz
Published 2011

GenePath: from mutations to genetic networks and back

by Juvan, Peter, Demsar, Janez, Shaulsky, Gad, Zupan, Blaz
Published 2005

Discovering disease-disease associations by fusing systems-level molecular data

by Žitnik, Marinka, Janjić, Vuk, Larminie, Chris, Zupan, Blaž, Pržulj, Nataša
Published 2013

Orthogonal matrix factorization enables integrative analysis of multiple RNA binding proteins

by Stražar, Martin, Žitnik, Marinka, Zupan, Blaž, Ule, Jernej, Curk, Tomaž
Published 2016

Sieve-based relation extraction of gene regulatory networks from biological literature

by Žitnik, Slavko, Žitnik, Marinka, Zupan, Blaž, Bajec, Marko
Published 2015

Heterogeneous computing architecture for fast detection of SNP-SNP interactions

by Sluga, Davor, Curk, Tomaz, Zupan, Blaz, Lotric, Uros
Published 2014

ABC Transporters in Dictyostelium discoideum Development

by Miranda, Edward Roshan, Zhuchenko, Olga, Toplak, Marko, Santhanam, Balaji, Zupan, Blaz, Kuspa, Adam, Shaulsky, Gad
Published 2013

Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions

by Sugimoto, Yoichiro, König, Julian, Hussain, Shobbir, Zupan, Blaž, Curk, Tomaž, Frye, Michaela, Ule, Jernej
Published 2012

Gene Prioritization by Compressive Data Fusion and Chaining

by Žitnik, Marinka, Nam, Edward A., Dinh, Christopher, Kuspa, Adam, Shaulsky, Gad, Zupan, Blaž
Published 2015

iCLIP - Transcriptome-wide Mapping of Protein-RNA Interactions with Individual Nucleotide Resolution

by Konig, Julian, Zarnack, Kathi, Rot, Gregor, Curk, Tomaz, Kayikci, Melis, Zupan, Blaz, Turner, Daniel J., Luscombe, Nicholas M., Ule, Jernej
Published 2011

Computational Models for Prediction of Yeast Strain Potential for Winemaking from Phenotypic Profiles

by Mendes, Inês, Franco-Duarte, Ricardo, Umek, Lan, Fonseca, Elza, Drumonde-Neves, João, Dequin, Sylvie, Zupan, Blaz, Schuller, Dorit
Published 2013

Leaps and lulls in the developmental transcriptome of Dictyostelium discoideum

by Rosengarten, Rafael David, Santhanam, Balaji, Fuller, Danny, Katoh-Kurasawa, Mariko, Loomis, William F, Zupan, Blaz, Shaulsky, Gad
Published 2015

miR669a and miR669q prevent skeletal muscle differentiation in postnatal cardiac progenitors

by Crippa, Stefania, Cassano, Marco, Messina, Graziella, Galli, Daniela, Galvez, Beatriz G., Curk, Tomaz, Altomare, Claudia, Ronzoni, Flavio, Toelen, Jaan, Gijsbers, Rik, Debyser, Zeger, Janssens, Stefan, Zupan, Blaz, Zaza, Antonio, Cossu, Giulio, Sampaolesi, Maurilio
Published 2011

Characterising the RNA targets and position-dependent splicing regulation by TDP-43; implications for neurodegenerative diseases

by Tollervey, James R., Curk, Tomaž, Rogelj, Boris, Briese, Michael, Cereda, Matteo, Kayikci, Melis, Hortobágyi, Tibor, Nishimura, Agnes L., Župunski, Vera, Patani, Rickie, Chandran, Siddharthan, Rot, Gregor, Zupan, Blaž, Shaw, Christopher E., Ule, Jernej
Published 2011

Widespread binding of FUS along nascent RNA regulates alternative splicing in the brain

by Rogelj, Boris, Easton, Laura E., Bogu, Gireesh K., Stanton, Lawrence W., Rot, Gregor, Curk, Tomaž, Zupan, Blaž, Sugimoto, Yoichiro, Modic, Miha, Haberman, Nejc, Tollervey, James, Fujii, Ritsuko, Takumi, Toru, Shaw, Christopher E., Ule, Jernej
Published 2012