Pre-amplification methods for tracking low-grade Plasmodium falciparum populations during scaled-up interventions in Southern Zambia

by Mharakurwa, Sungano, Daniels, Rachel, Scott, Alan, Wirth, Dyann F, Thuma, Philip, Volkman, Sarah K
Published 2014

An Adjustable Gas-Mixing Device to Increase Feasibility of In Vitro Culture of Plasmodium falciparum Parasites in the Field

by Bei, Amy K., Patel, Saurabh D., Volkman, Sarah K., Ahouidi, Ambroise D., Ndiaye, Daouda, Mboup, Souleymane, Wirth, Dyann F.
Published 2014

Genetic evidence that the Makira region in northeastern Madagascar is a hotspot of malaria transmission

by Rice, Benjamin L., Golden, Christopher D., Anjaranirina, Evelin Jean Gasta, Botelho, Carolina Mastella, Volkman, Sarah K., Hartl, Daniel L.
Published 2016

Methods to Increase the Sensitivity of High Resolution Melting Single Nucleotide Polymorphism Genotyping in Malaria

by Daniels, Rachel, Hamilton, Elizabeth J., Durfee, Katelyn, Ndiaye, Daouda, Wirth, Dyann F., Hartl, Daniel L., Volkman, Sarah K.
Published 2015

A global transcriptional analysis of Plasmodium falciparum malaria reveals a novel family of telomere-associated lncRNAs

by Broadbent, Kate M, Park, Daniel, Wolf, Ashley R, Van Tyne, Daria, Sims, Jennifer S, Ribacke, Ulf, Volkman, Sarah, Duraisingh, Manoj, Wirth, Dyann, Sabeti, Pardis C, Rinn, John L
Published 2011

A Systematic Map of Genetic Variation in Plasmodium falciparum

by Kidgell, Claire, Volkman, Sarah K, Daily, Johanna, Borevitz, Justin O, Plouffe, David, Zhou, Yingyao, Johnson, Jeffrey R, Le Roch, Karine G., Sarr, Ousmane, Ndir, Omar, Mboup, Soulyemane, Batalov, Serge, Wirth, Dyann F, Winzeler, Elizabeth A
Published 2006

Correction: A Systematic Map of Genetic Variation in Plasmodium falciparum

by Kidgell, Claire, Volkman, Sarah K, Daily, Johanna, Borevitz, Justin O, Plouffe, David, Zhou, Yingyao, Johnson, Jeffrey R, Roch, Karine G. Le, Sarr, Ousmane, Ndir, Omar, Mboup, Soulyemane, Batalov, Serge, Wirth, Dyann F, Winzeler, Elizabeth A
Published 2006

Polymorphism in dhfr/dhps genes, parasite density and ex vivo response to pyrimethamine in Plasmodium falciparum malaria parasites in Thies, Senegal☆

by Ndiaye, Daouda, Dieye, Baba, Ndiaye, Yaye D., Tyne, Daria Van, Daniels, Rachel, Bei, Amy K., Mbaye, Aminata, Valim, Clarissa, Lukens, Amanda, Mboup, Souleymane, Ndir, Omar, Wirth, Dyann F., Volkman, Sarah
Published 2013

SNP Genotyping Identifies New Signatures of Selection in a Deep Sample of West African Plasmodium falciparum Malaria Parasites

by Amambua-Ngwa, Alfred, Park, Daniel J., Volkman, Sarah K., Barnes, Kayla G., Bei, Amy K., Lukens, Amanda K., Sene, Papa, Van Tyne, Daria, Ndiaye, Daouda, Wirth, Dyann F., Conway, David J., Neafsey, Daniel E., Schaffner, Stephen F.
Published 2012

Analysis of pfhrp2 genetic diversity in Senegal and implications for use of rapid diagnostic tests

by Deme, Awa B, Park, Daniel J, Bei, Amy K, Sarr, Ousmane, Badiane, Aida Sadikh, Gueye, Papa El Hadji Omar, Ahouidi, Ambroise, Ndir, Omar, Mboup, Souleymane, Wirth, Dyann F, Ndiaye, Daouda, Volkman, Sarah K
Published 2014

Changes in drug sensitivity and anti-malarial drug resistance mutations over time among Plasmodium falciparum parasites in Senegal

by Van Tyne, Daria, Dieye, Baba, Valim, Clarissa, Daniels, Rachel F, Sène, Papa Diogoye, Lukens, Amanda K, Ndiaye, Mouhamadou, Bei, Amy K, Ndiaye, Yaye Die, Hamilton, Elizabeth J, Ndir, Omar, Mboup, Souleymane, Volkman, Sarah K, Wirth, Dyann F, Ndiaye, Daouda
Published 2013

Plasmodium falciparum K76T pfcrt Gene Mutations and Parasite Population Structure, Haiti, 2006–2009

by Charles, Macarthur, Das, Sanchita, Daniels, Rachel, Kirkman, Laura, Delva, Glavdia G., Destine, Rodney, Escalante, Ananias, Villegas, Leopoldo, Daniels, Noah M., Shigyo, Kristi, Volkman, Sarah K., Pape, Jean W., Golightly, Linnie M.
Published 2016

RDTs as a source of DNA to study Plasmodium falciparum drug resistance in isolates from Senegal and the Comoros Islands

by Papa Mze, Nasserdine, Ndiaye, Yaye Die, Diedhiou, Cyrille K., Rahamatou, Silai, Dieye, Baba, Daniels, Rachel F., Hamilton, Elizabeth J., Diallo, Mouhamadou, Bei, Amy K., Wirth, Dyann F., Mboup, Souleymane, Volkman, Sarah K., Ahouidi, Ambroise D., Ndiaye, Daouda
Published 2015

Altered drug susceptibility during host adaptation of a Plasmodium falciparum strain in a non-human primate model

by Obaldía III, Nicanor, Dow, Geoffrey S., Gerena, Lucia, Kyle, Dennis, Otero, William, Mantel, Pierre-Yves, Baro, Nicholas, Daniels, Rachel, Mukherjee, Angana, Childs, Lauren M., Buckee, Caroline, Duraisingh, Manoj T., Volkman, Sarah K., Wirth, Dyann F., Marti, Matthias
Published 2016

COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data

by Galinsky, Kevin, Valim, Clarissa, Salmier, Arielle, de Thoisy, Benoit, Musset, Lise, Legrand, Eric, Faust, Aubrey, Baniecki, Mary Lynn, Ndiaye, Daouda, Daniels, Rachel F, Hartl, Daniel L, Sabeti, Pardis C, Wirth, Dyann F, Volkman, Sarah K, Neafsey, Daniel E
Published 2015

Persistence of Plasmodium falciparum parasitemia after artemisinin combination therapy: evidence from a randomized trial in Uganda

by Chang, Hsiao-Han, Meibalan, Elamaran, Zelin, Justin, Daniels, Rachel, Eziefula, Alice C., Meyer, Evan C., Tadesse, Fitsum, Grignard, Lynn, Joice, Regina C., Drakeley, Chris, Wirth, Dyann F., Volkman, Sarah K., Buckee, Caroline, Bousema, Teun, Marti, Matthias
Published 2016

Hybrid selection for sequencing pathogen genomes from clinical samples

by Melnikov, Alexandre, Galinsky, Kevin, Rogov, Peter, Fennell, Timothy, Van Tyne, Daria, Russ, Carsten, Daniels, Rachel, Barnes, Kayla G, Bochicchio, James, Ndiaye, Daouda, Sene, Papa D, Wirth, Dyann F, Nusbaum, Chad, Volkman, Sarah K, Birren, Bruce W, Gnirke, Andreas, Neafsey, Daniel E
Published 2011

Human cerebral malaria and Plasmodium falciparum genotypes in Malawi

by Milner, Danny A, Vareta, Jimmy, Valim, Clarissa, Montgomery, Jacqui, Daniels, Rachel F, Volkman, Sarah K, Neafsey, Daniel E, Park, Daniel J, Schaffner, Stephen F, Mahesh, Nira C, Barnes, Kayla G, Rosen, David M, Lukens, Amanda K, Van-Tyne, Daria, Wiegand, Roger C, Sabeti, Pardis C, Seydel, Karl B, Glover, Simon J, Kamiza, Steve, Molyneux, Malcolm E, Taylor, Terrie E, Wirth, Dyann F
Published 2012

Genetic Surveillance Detects Both Clonal and Epidemic Transmission of Malaria following Enhanced Intervention in Senegal

by Daniels, Rachel, Chang, Hsiao-Han, Séne, Papa Diogoye, Park, Danny C., Neafsey, Daniel E., Schaffner, Stephen F., Hamilton, Elizabeth J., Lukens, Amanda K., Van Tyne, Daria, Mboup, Souleymane, Sabeti, Pardis C., Ndiaye, Daouda, Wirth, Dyann F., Hartl, Daniel L., Volkman, Sarah K.
Published 2013

Malaria Molecular Epidemiology: Lessons from the International Centers of Excellence for Malaria Research Network

by Escalante, Ananias A., Ferreira, Marcelo U., Vinetz, Joseph M., Volkman, Sarah K., Cui, Liwang, Gamboa, Dionicia, Krogstad, Donald J., Barry, Alyssa E., Carlton, Jane M., van Eijk, Anna Maria, Pradhan, Khageswar, Mueller, Ivo, Greenhouse, Bryan, Andreina Pacheco, M., Vallejo, Andres F., Herrera, Socrates, Felger, Ingrid
Published 2015