An analysis of gene/protein associations at PubMed scale

by Pyysalo, Sampo, Ohta, Tomoko, Tsujii, Jun’ichi
Published 2011

Event extraction for DNA methylation

by Ohta, Tomoko, Pyysalo, Sampo, Miwa, Makoto, Tsujii, Jun’ichi
Published 2011

Generalising semantic category disambiguation with large lexical resources for fun and profit

by Stenetorp, Pontus, Pyysalo, Sampo, Ananiadou, Sophia, Tsujii, Jun’ichi
Published 2014

Discovering and visualizing indirect associations between biomedical concepts

by Tsuruoka, Yoshimasa, Miwa, Makoto, Hamamoto, Kaisei, Tsujii, Jun'ichi, Ananiadou, Sophia
Published 2011

Automatic extraction of angiogenesis bioprocess from text

by Wang, Xinglong, McKendrick, Iain, Barrett, Ian, Dix, Ian, French, Tim, Tsujii, Jun'ichi, Ananiadou, Sophia
Published 2011

The Genia Event and Protein Coreference tasks of the BioNLP Shared Task 2011

by Kim, Jin-Dong, Nguyen, Ngan, Wang, Yue, Tsujii, Jun'ichi, Takagi, Toshihisa, Yonezawa, Akinori
Published 2012

Event extraction across multiple levels of biological organization

by Pyysalo, Sampo, Ohta, Tomoko, Miwa, Makoto, Cho, Han-Cheol, Tsujii, Jun'ichi, Ananiadou, Sophia
Published 2012

AGRA: analysis of gene ranking algorithms

by Kocbek, Simon, Sætre, Rune, Stiglic, Gregor, Kim, Jin-Dong, Pernek, Igor, Tsuruoka, Yoshimasa, Kokol, Peter, Ananiadou, Sophia, Tsujii, Jun'ichi
Published 2011

Automatic recognition of topic-classified relations between prostate cancer and genes using MEDLINE abstracts

by Chun, Hong-Woo, Tsuruoka, Yoshimasa, Kim, Jin-Dong, Shiba, Rie, Nagata, Naoki, Hishiki, Teruyoshi, Tsujii, Jun'ichi
Published 2006

Mining metabolites: extracting the yeast metabolome from the literature

by Nobata, Chikashi, Dobson, Paul D., Iqbal, Syed A., Mendes, Pedro, Tsujii, Jun’ichi, Kell, Douglas B., Ananiadou, Sophia
Published 2010

Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011

by Pyysalo, Sampo, Ohta, Tomoko, Rak, Rafal, Sullivan, Dan, Mao, Chunhong, Wang, Chunxia, Sobral, Bruno, Tsujii, Jun'ichi, Ananiadou, Sophia
Published 2012

Overview of the Cancer Genetics and Pathway Curation tasks of BioNLP Shared Task 2013

by Pyysalo, Sampo, Ohta, Tomoko, Rak, Rafal, Rowley, Andrew, Chun, Hong-Woo, Jung, Sung-Jae, Choi, Sung-Pil, Tsujii, Jun'ichi, Ananiadou, Sophia
Published 2015

U-Compare bio-event meta-service: compatible BioNLP event extraction services

by Kano, Yoshinobu, Björne, Jari, Ginter, Filip, Salakoski, Tapio, Buyko, Ekaterina, Hahn, Udo, Cohen, K Bretonnel, Verspoor, Karin, Roeder, Christophe, Hunter, Lawrence E, Kilicoglu, Halil, Bergler, Sabine, Van Landeghem, Sofie, Van Parys, Thomas, Van de Peer, Yves, Miwa, Makoto, Ananiadou, Sophia, Neves, Mariana, Pascual-Montano, Alberto, Özgür, Arzucan, Radev, Dragomir R, Riedel, Sebastian, Sætre, Rune, Chun, Hong-Woo, Kim, Jin-Dong, Pyysalo, Sampo, Ohta, Tomoko, Tsujii, Jun'ichi
Published 2011