Construction of predictive promoter models on the example of antibacterial response of human epithelial cells

by Shelest, Ekaterina, Wingender, Edgar
Published 2005

Editorial: Systems Biology of Transcription Regulation

by Shelest, Ekaterina, Wingender, Edgar
Published 2016

Novel traits of Trichoderma predicted through the analysis of its secretome

by Druzhinina, Irina S, Shelest, Ekaterina, Kubicek, Christian P
Published 2012

The fungal α-aminoadipate pathway for lysine biosynthesis requires two enzymes of the aconitase family for the isomerization of homocitrate to homoisocitrate

by Fazius, Felicitas, Shelest, Ekaterina, Gebhardt, Peter, Brock, Matthias
Published 2012

CASSIS and SMIPS: promoter-based prediction of secondary metabolite gene clusters in eukaryotic genomes

by Wolf, Thomas, Shelest, Vladimir, Nath, Neetika, Shelest, Ekaterina
Published 2016

Multimodular type I polyketide synthases in algae evolve by module duplications and displacement of AT domains in trans

by Shelest, Ekaterina, Heimerl, Natalie, Fichtner, Maximilian, Sasso, Severin
Published 2015

Draft Genome Sequences of Six Pseudoalteromonas Strains, P1-7a, P1-9, P1-13-1a, P1-16-1b, P1-25, and P1-26, Which Induce Larval Settlement and Metamorphosis in Hydractinia echinata

by Klassen, Jonathan L., Wolf, Thomas, Rischer, Maja, Guo, Huijuan, Shelest, Ekaterina, Clardy, Jon, Beemelmanns, Christine
Published 2015

Genome Sequences of Three Pseudoalteromonas Strains (P1-8, P1-11, and P1-30), Isolated from the Marine Hydroid Hydractinia echinata

by Klassen, Jonathan L., Rischer, Maja, Wolf, Thomas, Guo, Huijuan, Shelest, Ekaterina, Clardy, Jon, Beemelmanns, Christine
Published 2015

Draft Genome Sequence of Shewanella sp. Strain P1-14-1, a Bacterial Inducer of Settlement and Morphogenesis in Larvae of the Marine Hydroid Hydractinia echinata

by Rischer, Maja, Klassen, Jonathan L., Wolf, Thomas, Guo, Huijuan, Shelest, Ekaterina, Clardy, Jon, Beemelmanns, Christine
Published 2016

HapX Mediates Iron Homeostasis in the Pathogenic Dermatophyte Arthroderma benhamiae but Is Dispensable for Virulence

by Kröber, Antje, Scherlach, Kirstin, Hortschansky, Peter, Shelest, Ekaterina, Staib, Peter, Kniemeyer, Olaf, Brakhage, Axel A.
Published 2016

Data-based Reconstruction of Gene Regulatory Networks of Fungal Pathogens

by Guthke, Reinhard, Gerber, Silvia, Conrad, Theresia, Vlaic, Sebastian, Durmuş, Saliha, Çakır, Tunahan, Sevilgen, F. E., Shelest, Ekaterina, Linde, Jörg
Published 2016

Glucocorticoids limit acute lung inflammation in concert with inflammatory stimuli by induction of SphK1

by Vettorazzi, Sabine, Bode, Constantin, Dejager, Lien, Frappart, Lucien, Shelest, Ekaterina, Klaßen, Carina, Tasdogan, Alpaslan, Reichardt, Holger M., Libert, Claude, Schneider, Marion, Weih, Falk, Henriette Uhlenhaut, N., David, Jean-Pierre, Gräler, Markus, Kleiman, Anna, Tuckermann, Jan P.
Published 2015

Correction: Gene Expansion Shapes Genome Architecture in the Human Pathogen Lichtheimia corymbifera: An Evolutionary Genomics Analysis in the Ancient Terrestrial Mucorales (Mucorom...

by Schwartze, Volker U., Winter, Sascha, Shelest, Ekaterina, Marcet-Houben, Marina, Horn, Fabian, Wehner, Stefanie, Linde, Jörg, Valiante, Vito, Sammeth, Michael, Riege, Konstantin, Nowrousian, Minou, Kaerger, Kerstin, Jacobsen, Ilse D., Marz, Manja, Brakhage, Axel A., Gabaldón, Toni, Böcker, Sebastian, Voigt, Kerstin
Published 2016

Gene Expansion Shapes Genome Architecture in the Human Pathogen Lichtheimia corymbifera: An Evolutionary Genomics Analysis in the Ancient Terrestrial Mucorales (Mucoromycotina)

by Schwartze, Volker U., Winter, Sascha, Shelest, Ekaterina, Marcet-Houben, Marina, Horn, Fabian, Wehner, Stefanie, Linde, Jörg, Valiante, Vito, Sammeth, Michael, Riege, Konstantin, Nowrousian, Minou, Kaerger, Kerstin, Jacobsen, Ilse D., Marz, Manja, Brakhage, Axel A., Gabaldón, Toni, Böcker, Sebastian, Voigt, Kerstin
Published 2014

Comparative and functional genomics provide insights into the pathogenicity of dermatophytic fungi

by Burmester, Anke, Shelest, Ekaterina, Glöckner, Gernot, Heddergott, Christoph, Schindler, Susann, Staib, Peter, Heidel, Andrew, Felder, Marius, Petzold, Andreas, Szafranski, Karol, Feuermann, Marc, Pedruzzi, Ivo, Priebe, Steffen, Groth, Marco, Winkler, Robert, Li, Wenjun, Kniemeyer, Olaf, Schroeckh, Volker, Hertweck, Christian, Hube, Bernhard, White, Theodore C, Platzer, Matthias, Guthke, Reinhard, Heitman, Joseph, Wöstemeyer, Johannes, Zipfel, Peter F, Monod, Michel, Brakhage, Axel A
Published 2011

Comparative genomics to explore phylogenetic relationship, cryptic sexual potential and host specificity of Rhynchosporium species on grasses

by Penselin, Daniel, Münsterkötter, Martin, Kirsten, Susanne, Felder, Marius, Taudien, Stefan, Platzer, Matthias, Ashelford, Kevin, Paskiewicz, Konrad H., Harrison, Richard J., Hughes, David J., Wolf, Thomas, Shelest, Ekaterina, Graap, Jenny, Hoffmann, Jan, Wenzel, Claudia, Wöltje, Nadine, King, Kevin M., Fitt, Bruce D. L., Güldener, Ulrich, Avrova, Anna, Knogge, Wolfgang
Published 2016

Comparative Genome Analysis of Trichophyton rubrum and Related Dermatophytes Reveals Candidate Genes Involved in Infection

by Martinez, Diego A., Oliver, Brian G., Gräser, Yvonne, Goldberg, Jonathan M., Li, Wenjun, Martinez-Rossi, Nilce M., Monod, Michel, Shelest, Ekaterina, Barton, Richard C., Birch, Elizabeth, Brakhage, Axel A., Chen, Zehua, Gurr, Sarah J., Heiman, David, Heitman, Joseph, Kosti, Idit, Rossi, Antonio, Saif, Sakina, Samalova, Marketa, Saunders, Charles W., Shea, Terrance, Summerbell, Richard C., Xu, Jun, Young, Sarah, Zeng, Qiandong, Birren, Bruce W., Cuomo, Christina A., White, Theodore C.
Published 2012

Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus

by Vries, Ronald P. de, Riley, Robert, Wiebenga, Ad, Aguilar-Osorio, Guillermo, Amillis, Sotiris, Akemi Uchima, Cristiane, Anderluh, Gregor, Asaollahi, Mojtaba, Askin, Marion, Barry, Kerrie, Battaglia, Evy, Bayram, Ozgur, Benocci, Tiziano, Braus-Stromeyer, Susanna A., Caldana, Camila, Cánovas, David, Cerqueira, Gustavo C., Chen, Fusheng, Chen, Wanping, Choi, Cindy, Clum, Alicia, Corrêa dos Santos, Renato Augusto, Lima Damásio, André Ricardo de, Diallinas, George, Emri, Tamás, Fekete, Erzébet, Flipphi, Michel, Freyburg, Susanne, Gallo, Antonia, Gournas, Christos, Habgood, Rob, Hainaut, Matthieu, Harispe, Maria Laura, Henrissat, Bernard, Hildén, Kristiina S., Hope, Ryan, Hossain, Abeer, Karabika, Eugenia, Karaffa, Levente, Karanyi, Zsolt, Krasevec, Nada, Kuo, Alan, Kusch, Harald, LaButti, Kurt, Lagendijk, Ellen L., Lapidus, Alla, Levasseur, Anthony, Lindquist, Erika, Lipzen, Anna, Logrieco, Antonio F., MacCabe, Andrew, Mäkela, Miia R., Malavazi, Iran, Melin, Petter, Meyer, Vera, Mielnichuk, Natalia, Miskei, Márton, Molnár, Ákos P., Mulé, Giuseppina, Ngan, Chew Yee, Orejas, Margarita, Orosz, Erzsébet, Ouedraogo, Jean Paul, Overkamp, Karin M., Park, Hee-Soo, Perrone, Giancarlo, Piumi, Francois, Punt, Peter J., Ram, Arthur F.J., Ramon, Ana, Rauscher, Stefan, Record, Eric, Riaño-Pachón, Diego Mauricio, Robert, Vincent, Röhrig, Julian, Ruller, Roberto, Salamov, Asaf, Salih, Nadhira S., Samson, Rob A., Sándor, Erzsébet, Sanguinetti, Manuel, Schütze, Tabea, Sepčić, Kristina, Shelest, Ekaterina, Sherlock, Gavin, Sophianopoulou, Vicky, Squina, Fabio M., Sun, Hui, Susca, Antonia, Todd, Richard B., Tsang, Adrian, Unkles, Shiela E., Wiele, Nathalie van de, Rossen-Uffink, Diana van, Velasco de Castro Oliveira, Juliana, Vesth, Tammi C., Visser, Jaap, Yu, Jae-Hyuk, Zhou, Miaomiao, Andersen, Mikael R., Archer, David B., Baker, Scott E., Benoit, Isabelle, Brakhage, Axel A., Braus, Gerhard H., Fischer, Reinhard, Frisvad, Jens C., Goldman, Gustavo H., Houbraken, Jos, Oakley, Berl, Pócsi, István, Scazzocchio, Claudio, Seiboth, Bernhard, vanKuyk, Patricia A., Wortman, Jennifer, Dyer, Paul S., Grigoriev, Igor V.
Published 2017