RNA-sequencing reveals the complexities of the transcriptional response to lignocellulosic biofuel substrates in Aspergillus niger

by Archer, David B.
Published 2014

The roles of the zinc finger transcription factors XlnR, ClrA and ClrB in the breakdown of lignocellulose by Aspergillus niger

by Raulo, Roxane, Archer, David B., Kokolski, Matthew
Published 2016

The roles of the zinc finger transcription factors XlnR, ClrA and ClrB in the breakdown of lignocellulose by Aspergillus niger

by Raulo, Roxane, Kokolski, Matthew, Archer, David B.
Published 2016

Metabolic activity in dormant conidia ofAspergillus nigerand developmental changes during conidial outgrowth

by Novodvorska, Michaela, Stratford, Malcolm, Blythe, Martin J., Wilson, Raymond, Beniston, Richard G., Archer, David B.
Published 2016

Transcriptional regulation and responses in filamentous fungi exposed to lignocellulose

by Daly, Paul, van Munster, Jolanda M., Archer, David B., Raulo, Roxane
Published 2015

Extreme resistance to weak-acid preservatives in the spoilage yeast Zygosaccharomyces bailii☆

by Stratford, Malcolm, Steels, Hazel, Nebe-von-Caron, Gerhard, Novodvorska, Michaela, Hayer, Kimran, Archer, David B.
Published 2013

Population heterogeneity and dynamics in starter culture and lag phase adaptation of the spoilage yeast Zygosaccharomyces bailii to weak acid preservatives

by Stratford, Malcolm, Steels, Hazel, Nebe-von-Caron, Gerhard, Avery, Simon V., Novodvorska, Michaela, Archer, David B.
Published 2014

Genome-wide transcriptional response of Trichoderma reesei to lignocellulose using RNA sequencing and comparison with Aspergillus niger

by Ries, Laure, Pullan, Steven T, Delmas, Stéphane, Malla, Sunir, Blythe, Martin J, Archer, David B
Published 2013

A solid state fungal fermentation-based strategy for the hydrolysis of wheat straw☆

by Pensupa, Nattha, Jin, Meng, Kokolski, Matt, Archer, David B., Du, Chenyu
Published 2013

Investigating the physiological response of Pichia (Komagataella) pastoris GS115 to the heterologous expression of misfolded proteins using chemostat cultures

by Hesketh, Andrew R., Castrillo, Juan I., Sawyer, Trevor, Archer, David B., Oliver, Stephen G.
Published 2013

Metabolic activity in dormant conidia of Aspergillus niger and developmental changes during conidial outgrowth

by Novodvorska, Michaela, Stratford, Malcolm, Blythe, Martin J., Wilson, Raymond, Beniston, Richard G., Archer, David B.
Published 2016

Transcriptional landscape of Aspergillus niger at breaking of conidial dormancy revealed by RNA-sequencing

by Novodvorska, Michaela, Hayer, Kimran, Pullan, Steven T., Wilson, Raymond, Blythe, Martin J., Stam, Hein, Stratford, Malcolm, Archer, David B.
Published 2013

Native-state stability determines the extent of degradation relative to secretion of protein variants from Pichia pastoris

by Whyteside, Graham, Alcocer, Marcos J.C., Kumita, Janet R., Dobson, Christopher M., Lazarou, Maria, Pleass, Richard J., Archer, David B.
Published 2011

Application of carbohydrate arrays coupled with mass spectrometry to detect activity of plant-polysaccharide degradative enzymes from the fungus Aspergillus niger

by van Munster, Jolanda M., Thomas, Baptiste, Riese, Michel, Davis, Andrienne L., Gray, Christopher J., Archer, David B., Flitsch, Sabine L.
Published 2017

Native-State Stability Determines the Extent of Degradation Relative to Secretion of Protein Variants from Pichia pastoris

by Whyteside, Graham, Alcocer, Marcos J. C., Kumita, Janet R., Dobson, Christopher M., Lazarou, Maria, Pleass, Richard J., Archer, David B.
Published 2011

Trancriptional landscape of Aspergillus niger at breaking of conidial dormancy revealed by RNA-sequencing

by Novodvorska, Michaela, Hayer, Kimran, Pullan, Steven T, Wilson, Raymond, Blythe, Martin J, Stam, Hein, Stratford, Malcolm, Archer, David B
Published 2013

Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing

by Delmas, Stéphane, Pullan, Steven T., Gaddipati, Sanyasi, Kokolski, Matthew, Malla, Sunir, Blythe, Martin J., Ibbett, Roger, Campbell, Maria, Liddell, Susan, Aboobaker, Aziz, Tucker, Gregory A., Archer, David B.
Published 2012

Transcriptomic responses of mixed cultures of ascomycete fungi to lignocellulose using dual RNA-seq reveal inter-species antagonism and limited beneficial effects on CAZyme express...

by Daly, Paul, van Munster, Jolanda M., Kokolski, Matthew, Sang, Fei, Blythe, Martin J., Malla, Sunir, Velasco de Castro Oliveira, Juliana, Goldman, Gustavo H., Archer, David B.
Published 2017

Genomic analysis of the secretion stress response in the enzyme-producing cell factory Aspergillus niger

by Guillemette, Thomas, van Peij, Noël NME, Goosen, Theo, Lanthaler, Karin, Robson, Geoffrey D, van den Hondel, Cees AMJJ, Stam, Hein, Archer, David B
Published 2007

Uncovering the Genome-Wide Transcriptional Responses of the Filamentous Fungus Aspergillus niger to Lignocellulose Using RNA Sequencing

by Delmas, Stéphane, Pullan, Steven T., Gaddipati, Sanyasi, Kokolski, Matthew, Malla, Sunir, Blythe, Martin J., Ibbett, Roger, Campbell, Maria, Liddell, Susan, Aboobaker, Aziz, Tucker, Gregory A., Archer, David B.
Published 2012