Galaxy tools and workflows for sequence analysis with applications in molecular plant pathology

by Cock, Peter J.A., Grüning, Björn A., Paszkiewicz, Konrad, Pritchard, Leighton
Published 2013

Bio.Phylo: A unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython

by Talevich, Eric, Invergo, Brandon M, Cock, Peter JA, Chapman, Brad A
Published 2012

Gene expression changes in diapause or quiescent potato cyst nematode, Globodera pallida, eggs after hydration or exposure to tomato root diffusate

by Palomares-Rius, Juan Emilio, Hedley, Pete, Cock, Peter J.A., Morris, Jenny A., Jones, John T., Blok, Vivian C.
Published 2016

Identification and localisation of the NB-LRR gene family within the potato genome

by Jupe, Florian, Pritchard, Leighton, Etherington, Graham J, MacKenzie, Katrin, Cock, Peter JA, Wright, Frank, Sharma, Sanjeev Kumar, Bolser, Dan, Bryan, Glenn J, Jones, Jonathan DG, Hein, Ingo
Published 2012

A metagenetic approach to determine the diversity and distribution of cyst nematodes at the level of the country, the field and the individual

by Eves‐van den Akker, Sebastian, Lilley, Catherine J., Reid, Alex, Pickup, Jon, Anderson, Eric, Cock, Peter J.A., Blaxter, Mark, Urwin, Peter E., Jones, John T., Blok, Vivian C.
Published 2015

The 2016 Bioinformatics Open Source Conference (BOSC)

by Harris, Nomi L., Cock, Peter J.A., Chapman, Brad, Fields, Christopher J., Hokamp, Karsten, Lapp, Hilmar, Muñoz-Torres, Monica, Wiencko, Heather
Published 2016

Genomic characterisation of the effector complement of the potato cyst nematode Globodera pallida

by Thorpe, Peter, Mantelin, Sophie, Cock, Peter JA, Blok, Vivian C, Coke, Mirela C, Eves-van den Akker, Sebastian, Guzeeva, Elena, Lilley, Catherine J, Smant, Geert, Reid, Adam J, Wright, Kathryn M, Urwin, Peter E, Jones, John T
Published 2014

Community-driven development for computational biology at Sprints, Hackathons and Codefests

by Möller, Steffen, Afgan, Enis, Banck, Michael, Bonnal, Raoul JP, Booth, Timothy, Chilton, John, Cock, Peter JA, Gumbel, Markus, Harris, Nomi, Holland, Richard, Kalaš, Matúš, Kaján, László, Kibukawa, Eri, Powel, David R, Prins, Pjotr, Quinn, Jacqueline, Sallou, Olivier, Strozzi, Francesco, Seemann, Torsten, Sloggett, Clare, Soiland-Reyes, Stian, Spooner, William, Steinbiss, Sascha, Tille, Andreas, Travis, Anthony J, Guimera, Roman Valls, Katayama, Toshiaki, Chapman, Brad A
Published 2014

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

by Katayama, Toshiaki, Wilkinson, Mark D, Micklem, Gos, Kawashima, Shuichi, Yamaguchi, Atsuko, Nakao, Mitsuteru, Yamamoto, Yasunori, Okamoto, Shinobu, Oouchida, Kenta, Chun, Hong-Woo, Aerts, Jan, Afzal, Hammad, Antezana, Erick, Arakawa, Kazuharu, Aranda, Bruno, Belleau, Francois, Bolleman, Jerven, Bonnal, Raoul JP, Chapman, Brad, Cock, Peter JA, Eriksson, Tore, Gordon, Paul MK, Goto, Naohisa, Hayashi, Kazuhiro, Horn, Heiko, Ishiwata, Ryosuke, Kaminuma, Eli, Kasprzyk, Arek, Kawaji, Hideya, Kido, Nobuhiro, Kim, Young Joo, Kinjo, Akira R, Konishi, Fumikazu, Kwon, Kyung-Hoon, Labarga, Alberto, Lamprecht, Anna-Lena, Lin, Yu, Lindenbaum, Pierre, McCarthy, Luke, Morita, Hideyuki, Murakami, Katsuhiko, Nagao, Koji, Nishida, Kozo, Nishimura, Kunihiro, Nishizawa, Tatsuya, Ogishima, Soichi, Ono, Keiichiro, Oshita, Kazuki, Park, Keun-Joon, Prins, Pjotr, Saito, Taro L, Samwald, Matthias, Satagopam, Venkata P, Shigemoto, Yasumasa, Smith, Richard, Splendiani, Andrea, Sugawara, Hideaki, Taylor, James, Vos, Rutger A, Withers, David, Yamasaki, Chisato, Zmasek, Christian M, Kawamoto, Shoko, Okubo, Kosaku, Asai, Kiyoshi, Takagi, Toshihisa
Published 2013

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

by Katayama, Toshiaki, Wilkinson, Mark D, Aoki-Kinoshita, Kiyoko F, Kawashima, Shuichi, Yamamoto, Yasunori, Yamaguchi, Atsuko, Okamoto, Shinobu, Kawano, Shin, Kim, Jin-Dong, Wang, Yue, Wu, Hongyan, Kano, Yoshinobu, Ono, Hiromasa, Bono, Hidemasa, Kocbek, Simon, Aerts, Jan, Akune, Yukie, Antezana, Erick, Arakawa, Kazuharu, Aranda, Bruno, Baran, Joachim, Bolleman, Jerven, Bonnal, Raoul JP, Buttigieg, Pier Luigi, Campbell, Matthew P, Chen, Yi-an, Chiba, Hirokazu, Cock, Peter JA, Cohen, K Bretonnel, Constantin, Alexandru, Duck, Geraint, Dumontier, Michel, Fujisawa, Takatomo, Fujiwara, Toyofumi, Goto, Naohisa, Hoehndorf, Robert, Igarashi, Yoshinobu, Itaya, Hidetoshi, Ito, Maori, Iwasaki, Wataru, Kalaš, Matúš, Katoda, Takeo, Kim, Taehong, Kokubu, Anna, Komiyama, Yusuke, Kotera, Masaaki, Laibe, Camille, Lapp, Hilmar, Lütteke, Thomas, Marshall, M Scott, Mori, Takaaki, Mori, Hiroshi, Morita, Mizuki, Murakami, Katsuhiko, Nakao, Mitsuteru, Narimatsu, Hisashi, Nishide, Hiroyo, Nishimura, Yosuke, Nystrom-Persson, Johan, Ogishima, Soichi, Okamura, Yasunobu, Okuda, Shujiro, Oshita, Kazuki, Packer, Nicki H, Prins, Pjotr, Ranzinger, Rene, Rocca-Serra, Philippe, Sansone, Susanna, Sawaki, Hiromichi, Shin, Sung-Ho, Splendiani, Andrea, Strozzi, Francesco, Tadaka, Shu, Toukach, Philip, Uchiyama, Ikuo, Umezaki, Masahito, Vos, Rutger, Whetzel, Patricia L, Yamada, Issaku, Yamasaki, Chisato, Yamashita, Riu, York, William S, Zmasek, Christian M, Kawamoto, Shoko, Takagi, Toshihisa
Published 2014