Erratum to: Lack of a significant impact of Gag-Protease-mediated HIV-1 replication capacity on clinical parameters in treatment-naive Japanese individuals

by Sakai, Keiko, Chikata, Takayuki, Brumme, Zabrina L., Brumme, Chanson J., Gatanaga, Hiroyuki, Oka, Shinichi, Takiguchi, Masafumi
Published 2015

Lack of a significant impact of Gag-Protease-mediated HIV-1 replication capacity on clinical parameters in treatment-naive Japanese individuals

by Sakai, Keiko, Chikata, Takayuki, Brumme, Zabrina L., Brumme, Chanson J., Gatanag, Hiroyuki, Oka, Shinichi, Takiguchi, Masafumi
Published 2015

Characteristics and Outcomes of Initial Virologic Suppressors during Analytic Treatment Interruption in a Therapeutic HIV-1 gag Vaccine Trial

by Li, Jonathan Z., Brumme, Chanson J., Lederman, Michael M., Brumme, Zabrina L., Wang, Hongying, Spritzler, John, Carrington, Mary, Medvik, Kathleen, Walker, Bruce D., Schooley, Robert T., Kuritzkes, Daniel R.
Published 2012

Technical and Regulatory Shortcomings of the TaqMan Version 1 HIV Viral Load Assay

by Brumme, Chanson J., Swenson, Luke C., Wynhoven, Brian, Yip, Benita, Skinner, Stuart, Lima, Viviane Dias, Montaner, Julio S. G., Harrigan, P. Richard
Published 2012

Limited Evolution of Inferred HIV-1 Tropism while Viremia Is Undetectable during Standard HAART Therapy

by Lee, Guinevere Q., Dong, Winnie, Mo, Theresa, Knapp, David J. H. F., Brumme, Chanson J., Woods, Conan K., Kanters, Steve, Yip, Benita, Harrigan, P. Richard
Published 2014

Evidence of Differential HLA Class I-Mediated Viral Evolution in Functional and Accessory/Regulatory Genes of HIV-1

by Brumme, Zabrina L, Brumme, Chanson J, Heckerman, David, Korber, Bette T, Daniels, Marcus, Carlson, Jonathan, Kadie, Carl, Bhattacharya, Tanmoy, Chui, Celia, Szinger, James, Mo, Theresa, Hogg, Robert S, Montaner, Julio S. G, Frahm, Nicole, Brander, Christian, Walker, Bruce D, Harrigan, P. Richard
Published 2007

Correction: Evidence of Differential HLA Class I-Mediated Viral Evolution in Functional and Accessory/Regulatory Genes of HIV-1

by Brumme, Zabrina L, Brumme, Chanson J, Heckerman, David, Korber, Bette T, Daniels, Marcus, Carlson, Jonathan, Kadie, Carl, Bhattacharya, Tanmoy, Chui, Celia, Szinger, James, Mo, Theresa, Hogg, Robert S, Montaner, Julio S. G, Frahm, Nicole, Brander, Christian, Walker, Bruce D, Harrigan, P. Richard
Published 2007

Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection

by Shimizu, Akihisa, Kawana-Tachikawa, Ai, Yamagata, Atsushi, Han, Chungyong, Zhu, Dayong, Sato, Yusuke, Nakamura, Hitomi, Koibuchi, Tomohiko, Carlson, Jonathan, Martin, Eric, Brumme, Chanson J., Shi, Yi, Gao, George F., Brumme, Zabrina L., Fukai, Shuya, Iwamoto, Aikichi
Published 2013

Theoretical and experimental assessment of degenerate primer tagging in ultra-deep applications of next-generation sequencing

by Liang, Richard H., Mo, Theresa, Dong, Winnie, Lee, Guinevere Q., Swenson, Luke C., McCloskey, Rosemary M., Woods, Conan K., Brumme, Chanson J., Ho, Cynthia K.Y., Schinkel, Janke, Joy, Jeffrey B., Harrigan, P. Richard, Poon, Art F.Y.
Published 2014

HLA-Associated Immune Escape Pathways in HIV-1 Subtype B Gag, Pol and Nef Proteins

by Brumme, Zabrina L., John, Mina, Carlson, Jonathan M., Brumme, Chanson J., Chan, Dennison, Brockman, Mark A., Swenson, Luke C., Tao, Iris, Szeto, Sharon, Rosato, Pamela, Sela, Jennifer, Kadie, Carl M., Frahm, Nicole, Brander, Christian, Haas, David W., Riddler, Sharon A., Haubrich, Richard, Walker, Bruce D., Harrigan, P. Richard, Heckerman, David, Mallal, Simon
Published 2009

Ability of HIV-1 Nef to downregulate CD4 and HLA class I differs among viral subtypes

by Mann, Jaclyn K, Byakwaga, Helen, Kuang, Xiaomei T, Le, Anh Q, Brumme, Chanson J, Mwimanzi, Philip, Omarjee, Saleha, Martin, Eric, Lee, Guinevere Q, Baraki, Bemuluyigza, Danroth, Ryan, McCloskey, Rosemary, Muzoora, Conrad, Bangsberg, David R, Hunt, Peter W, Goulder, Philip JR, Walker, Bruce D, Harrigan, P Richard, Martin, Jeff N, Ndung’u, Thumbi, Brockman, Mark A, Brumme, Zabrina L
Published 2013

Definition of the viral targets of protective HIV-1-specific T cell responses

by Mothe, Beatriz, Llano, Anuska, Ibarrondo, Javier, Daniels, Marcus, Miranda, Cristina, Zamarreño, Jennifer, Bach, Vanessa, Zuniga, Rosario, Pérez-Álvarez, Susana, Berger, Christoph T, Puertas, Maria C, Martinez-Picado, Javier, Rolland, Morgane, Farfan, Marilu, Szinger, James J, Hildebrand, William H, Yang, Otto O, Sanchez-Merino, Victor, Brumme, Chanson J, Brumme, Zabrina L, Heckerman, David, Allen, Todd M, Mullins, James I, Gómez, Guadalupe, Goulder, Philip J, Walker , Bruce D, Gatell, Jose M, Clotet, Bonaventura, Korber, Bette T, Sanchez, Jorge, Brander, Christian
Published 2011

Genotypic and Functional Impact of HIV-1 Adaptation to Its Host Population during the North American Epidemic

by Cotton, Laura A., Kuang, Xiaomei T., Le, Anh Q., Carlson, Jonathan M., Chan, Benjamin, Chopera, Denis R., Brumme, Chanson J., Markle, Tristan J., Martin, Eric, Shahid, Aniqa, Anmole, Gursev, Mwimanzi, Philip, Nassab, Pauline, Penney, Kali A., Rahman, Manal A., Milloy, M.-J., Schechter, Martin T., Markowitz, Martin, Carrington, Mary, Walker, Bruce D., Wagner, Theresa, Buchbinder, Susan, Fuchs, Jonathan, Koblin, Beryl, Mayer, Kenneth H., Harrigan, P. Richard, Brockman, Mark A., Poon, Art F. Y., Brumme, Zabrina L.
Published 2014

A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control

by Bartha, István, Carlson, Jonathan M, Brumme, Chanson J, McLaren, Paul J, Brumme, Zabrina L, John, Mina, Haas, David W, Martinez-Picado, Javier, Dalmau, Judith, López-Galíndez, Cecilio, Casado, Concepción, Rauch, Andri, Günthard, Huldrych F, Bernasconi, Enos, Vernazza, Pietro, Klimkait, Thomas, Yerly, Sabine, O’Brien, Stephen J, Listgarten, Jennifer, Pfeifer, Nico, Lippert, Christoph, Fusi, Nicolo, Kutalik, Zoltán, Allen, Todd M, Müller, Viktor, Harrigan, P Richard, Heckerman, David, Telenti, Amalio, Fellay, Jacques
Published 2013

Impact of Pre-adapted HIV Transmission

by Carlson, Jonathan M., Du, Victor Y., Pfeifer, Nico, Bansal, Anju, Tan, Vincent Y.F., Power, Karen, Brumme, Chanson J., Kreimer, Anat, DeZiel, Charles E., Fusi, Nicolo, Schaefer, Malinda, Brockman, Mark A., Gilmour, Jill, Price, Matt A., Kilembe, William, Haubrich, Richard, John, Mina, Mallal, Simon, Shapiro, Roger, Frater, John, Harrigan, P. Richard, Ndung’u, Thumbi, Allen, Susan, Heckerman, David, Sidney, John, Allen, Todd M., Goulder, Philip J.R., Brumme, Zabrina L., Hunter, Eric, Goepfert, Paul A.
Published 2016

Whole Genome Deep Sequencing of HIV-1 Reveals the Impact of Early Minor Variants Upon Immune Recognition During Acute Infection

by Henn, Matthew R., Boutwell, Christian L., Charlebois, Patrick, Lennon, Niall J., Power, Karen A., Macalalad, Alexander R., Berlin, Aaron M., Malboeuf, Christine M., Ryan, Elizabeth M., Gnerre, Sante, Zody, Michael C., Erlich, Rachel L., Green, Lisa M., Berical, Andrew, Wang, Yaoyu, Casali, Monica, Streeck, Hendrik, Bloom, Allyson K., Dudek, Tim, Tully, Damien, Newman, Ruchi, Axten, Karen L., Gladden, Adrianne D., Battis, Laura, Kemper, Michael, Zeng, Qiandong, Shea, Terrance P., Gujja, Sharvari, Zedlack, Carmen, Gasser, Olivier, Brander, Christian, Hess, Christoph, Günthard, Huldrych F., Brumme, Zabrina L., Brumme, Chanson J., Bazner, Suzane, Rychert, Jenna, Tinsley, Jake P., Mayer, Ken H., Rosenberg, Eric, Pereyra, Florencia, Levin, Joshua Z., Young, Sarah K., Jessen, Heiko, Altfeld, Marcus, Birren, Bruce W., Walker, Bruce D., Allen, Todd M.
Published 2012