Immunoinformatics Comes of Age

by Korber, Bette, LaBute, Montiago, Yusim, Karina
Published 2006

A Mechanistic Understanding of Allosteric Immune Escape Pathways in the HIV-1 Envelope Glycoprotein

by Sethi, Anurag, Tian, Jianhui, Derdeyn, Cynthia A., Korber, Bette, Gnanakaran, S.
Published 2013

A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes

by Schultz, Anne-Kathrin, Zhang, Ming, Leitner, Thomas, Kuiken, Carla, Korber, Bette, Morgenstern, Burkhard, Stanke, Mario
Published 2006

Coping with Viral Diversity in HIV Vaccine Design: A Response to Nickle et al

by Fischer, Will, Liao, H. X, Haynes, Barton F, Letvin, Norman L, Korber, Bette
Published 2008

Epigraph: A Vaccine Design Tool Applied to an HIV Therapeutic Vaccine and a Pan-Filovirus Vaccine

by Theiler, James, Yoon, Hyejin, Yusim, Karina, Picker, Louis J., Fruh, Klaus, Korber, Bette
Published 2016

Effect of Glycosylation on an Immunodominant Region in the V1V2 Variable Domain of the HIV-1 Envelope gp120 Protein

by Tian, Jianhui, López, Cesar A., Derdeyn, Cynthia A., Jones, Morris S., Pinter, Abraham, Korber, Bette, Gnanakaran, S.
Published 2016

CATNAP: a tool to compile, analyze and tally neutralizing antibody panels

by Yoon, Hyejin, Macke, Jennifer, West, Anthony P., Foley, Brian, Bjorkman, Pamela J., Korber, Bette, Yusim, Karina
Published 2015

jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1

by Zhang, Ming, Schultz, Anne-Kathrin, Calef, Charles, Kuiken, Carla, Leitner, Thomas, Korber, Bette, Morgenstern, Burkhard, Stanke, Mario
Published 2006

Proteome-wide analysis of HIV-specific naive and memory CD4+ T cells in unexposed blood donors

by Campion, Suzanne L., Brodie, Tess M., Fischer, William, Korber, Bette T., Rossetti, Astrea, Goonetilleke, Nilu, McMichael, Andrew J., Sallusto, Federica
Published 2014

A multiple-alignment based primer design algorithm for genetically highly variable DNA targets

by Brodin, Johanna, Krishnamoorthy, Mohan, Athreya, Gayathri, Fischer, Will, Hraber, Peter, Gleasner, Cheryl, Green, Lance, Korber, Bette, Leitner, Thomas
Published 2013

Correction: Design and Pre-Clinical Evaluation of a Universal HIV-1 Vaccine

by Létourneau, Sven, Im, Eung-Jun, Mashishi, Tumelo, Brereton, Choechoe, Bridgeman, Anne, Yang, Hongbing, Dorrell, Lucy, Dong, Tao, Korber, Bette, McMichael, Andrew J., Hanke, Tomáš
Published 2011

Design and Pre-Clinical Evaluation of a Universal HIV-1 Vaccine

by Létourneau, Sven, Im, Eung-Jun, Mashishi, Tumelo, Brereton, Choechoe, Bridgeman, Anne, Yang, Hongbing, Dorrell, Lucy, Dong, Tao, Korber, Bette, McMichael, Andrew J., Hanke, Tomáš
Published 2007

Integrated sequence and immunology filovirus database at Los Alamos

by Yusim, Karina, Yoon, Hyejin, Foley, Brian, Feng, Shihai, Macke, Jennifer, Dimitrijevic, Mira, Abfalterer, Werner, Szinger, James, Fischer, Will, Kuiken, Carla, Korber, Bette
Published 2016

Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells

by Smith, Kellie N., Mailliard, Robbie B., Piazza, Paolo A., Fischer, Will, Korber, Bette T., Fecek, Ronald J., Ratner, Deena, Gupta, Phalguni, Mullins, James I., Rinaldo, Charles R.
Published 2016

Recombination-mediated escape from primary CD8+ T cells in acute HIV-1 infection

by Ritchie, Adam John, Cai, Fangping, Smith, Nicola MG, Chen, Sheri, Song, Hongshuo, Brackenridge, Simon, Abdool Karim, Salim S, Korber, Bette T, McMichael, Andrew J, Gao, Feng, Goonetilleke, Nilu
Published 2014

A Multi-Component Prime-Boost Vaccination Regimen with a Consensus MOMP Antigen Enhances Chlamydia trachomatis Clearance

by Badamchi-Zadeh, Alexander, McKay, Paul F., Korber, Bette T., Barinaga, Guillermo, Walters, Adam A., Nunes, Alexandra, Gomes, João Paulo, Follmann, Frank, Tregoning, John S., Shattock, Robin J.
Published 2016

Erratum for Smith et al., Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells

by Smith, Kellie N., Mailliard, Robbie B., Piazza, Paolo A., Fischer, Will, Korber, Bette T., Fecek, Ronald J., Ratner, Deena, Gupta, Phalguni, Mullins, James I., Rinaldo, Charles R.
Published 2016

A Signature in HIV-1 Envelope Leader Peptide Associated with Transition from Acute to Chronic Infection Impacts Envelope Processing and Infectivity

by Asmal, Mohammed, Hellmann, Ina, Liu, Weimin, Keele, Brandon F., Perelson, Alan S., Bhattacharya, Tanmoy, Gnanakaran, S., Daniels, Marcus, Haynes, Barton F., Korber, Bette T., Hahn, Beatrice H., Shaw, George M., Letvin, Norman L.
Published 2011

Evidence of Differential HLA Class I-Mediated Viral Evolution in Functional and Accessory/Regulatory Genes of HIV-1

by Brumme, Zabrina L, Brumme, Chanson J, Heckerman, David, Korber, Bette T, Daniels, Marcus, Carlson, Jonathan, Kadie, Carl, Bhattacharya, Tanmoy, Chui, Celia, Szinger, James, Mo, Theresa, Hogg, Robert S, Montaner, Julio S. G, Frahm, Nicole, Brander, Christian, Walker, Bruce D, Harrigan, P. Richard
Published 2007

Correction: Evidence of Differential HLA Class I-Mediated Viral Evolution in Functional and Accessory/Regulatory Genes of HIV-1

by Brumme, Zabrina L, Brumme, Chanson J, Heckerman, David, Korber, Bette T, Daniels, Marcus, Carlson, Jonathan, Kadie, Carl, Bhattacharya, Tanmoy, Chui, Celia, Szinger, James, Mo, Theresa, Hogg, Robert S, Montaner, Julio S. G, Frahm, Nicole, Brander, Christian, Walker, Bruce D, Harrigan, P. Richard
Published 2007