Circuit diagrams for biological networks

by Kohn, Kurt W, Aladjem, Mirit I
Published 2006

ATAD5 regulates the lifespan of DNA replication factories by modulating PCNA level on the chromatin

by Lee, Kyoo-young, Fu, Haiqing, Aladjem, Mirit I., Myung, Kyungjae
Published 2013

SIRT1/PARP1 crosstalk: connecting DNA damage and metabolism

by Luna, Augustin, Aladjem, Mirit I, Kohn, Kurt W
Published 2013

Initiation of DNA replication at the human β-globin 3′ enhancer

by Buzina, Alla, Aladjem, Mirit I., Kolman, John L., Wahl, Geoffrey M., Ellis, James
Published 2005

Depicting combinatorial complexity with the molecular interaction map notation

by Kohn, Kurt W, Aladjem, Mirit I, Kim, Sohyoung, Weinstein, John N, Pommier, Yves
Published 2006

A chromatin structure‐based model accurately predicts DNA replication timing in human cells

by Gindin, Yevgeniy, Valenzuela, Manuel S, Aladjem, Mirit I, Meltzer, Paul S, Bilke, Sven
Published 2014

Predicted Role of NAD Utilization in the Control of Circadian Rhythms during DNA Damage Response

by Luna, Augustin, McFadden, Geoffrey B., Aladjem, Mirit I., Kohn, Kurt W.
Published 2015

Allele-specific analysis of DNA replication origins in mammalian cells

by Bartholdy, Boris, Mukhopadhyay, Rituparna, Lajugie, Julien, Aladjem, Mirit I., Bouhassira, Eric E.
Published 2015

Mus81-mediated DNA cleavage resolves replication forks stalled by topoisomerase I–DNA complexes

by Regairaz, Marie, Zhang, Yong-Wei, Fu, Haiqing, Agama, Keli K., Tata, Nalini, Agrawal, Surbhi, Aladjem, Mirit I., Pommier, Yves
Published 2011

A formal MIM specification and tools for the common exchange of MIM diagrams: an XML-Based format, an API, and a validation method

by Luna, Augustin, Karac, Evrim I, Sunshine, Margot, Chang, Lucas, Nussinov, Ruth, Aladjem, Mirit I, Kohn, Kurt W
Published 2011

ColoWeb: a resource for analysis of colocalization of genomic features

by Kim, RyangGuk, Smith, Owen K, Wong, Wing Chung, Ryan, Alex M, Ryan, Michael C, Aladjem, Mirit I
Published 2015

DNA Methylation Supports Intrinsic Epigenetic Memory in Mammalian Cells

by Feng, Yong-Qing, Desprat, Romain, Fu, Haiqing, Olivier, Emmanuel, Lin, Chii Mei, Lobell, Amanda, Gowda, Shilpa N, Aladjem, Mirit I, Bouhassira, Eric E
Published 2006

Preferential Localization of Human Origins of DNA Replication at the 5′-Ends of Expressed Genes and at Evolutionarily Conserved DNA Sequences

by Valenzuela, Manuel S., Chen, Yidong, Davis, Sean, Yang, Fan, Walker, Robert L., Bilke, Sven, Lueders, John, Martin, Melvenia M., Aladjem, Mirit I., Massion, Pierre P., Meltzer, Paul S.
Published 2011

Methylation of Histone H3 on Lysine 79 Associates with a Group of Replication Origins and Helps Limit DNA Replication Once per Cell Cycle

by Fu, Haiqing, Maunakea, Alika K., Martin, Melvenia M., Huang, Liang, Zhang, Ya, Ryan, Michael, Kim, RyangGuk, Lin, Chii Meil, Zhao, Keji, Aladjem, Mirit I.
Published 2013

Correction: Methylation of Histone H3 on Lysine 79 Associates with a Group of Replication Origins and Helps Limit DNA Replication Once per Cell Cycle

by Fu, Haiqing, Maunakea, Alika K., Martin, Melvenia M., Huang, Liang, Zhang, Ya, Ryan, Michael, Kim, RyangGuk, Lin, Chii Meil, Zhao, Keji, Aladjem, Mirit I.
Published 2013

Allele-Specific Genome-wide Profiling in Human Primary Erythroblasts Reveal Replication Program Organization

by Mukhopadhyay, Rituparna, Lajugie, Julien, Fourel, Nicolas, Selzer, Ari, Schizas, Michael, Bartholdy, Boris, Mar, Jessica, Lin, Chii Mei, Martin, Melvenia M., Ryan, Michael, Aladjem, Mirit I., Bouhassira, Eric E.
Published 2014

The DNA repair endonuclease Mus81 facilitates fast DNA replication in the absence of exogenous damage

by Fu, Haiqing, Martin, Melvenia M., Regairaz, Marie, Huang, Liang, You, Yang, Lin, Chi-Mei, Ryan, Michael, Kim, RyangGuk, Shimura, Tsutomu, Pommier, Yves, Aladjem, Mirit I.
Published 2015

Replication of alpha-satellite DNA arrays in endogenous human centromeric regions and in human artificial chromosome

by Erliandri, Indri, Fu, Haiqing, Nakano, Megumi, Kim, Jung-Hyun, Miga, Karen H., Liskovykh, Mikhail, Earnshaw, William C., Masumoto, Hiroshi, Kouprina, Natalay, Aladjem, Mirit I., Larionov, Vladimir
Published 2014

A replicator-specific binding protein essential for site-specific initiation of DNA replication in mammalian cells

by Zhang, Ya, Huang, Liang, Fu, Haiqing, Smith, Owen K., Lin, Chii Mei, Utani, Koichi, Rao, Mishal, Reinhold, William C., Redon, Christophe E., Ryan, Michael, Kim, RyangGuk, You, Yang, Hanna, Harlington, Boisclair, Yves, Long, Qiaoming, Aladjem, Mirit I.
Published 2016

Distinct epigenetic features of differentiation-regulated replication origins

by Smith, Owen K., Kim, RyanGuk, Fu, Haiqing, Martin, Melvenia M., Lin, Chii Mei, Utani, Koichi, Zhang, Ya, Marks, Anna B., Lalande, Marc, Chamberlain, Stormy, Libbrecht, Maxwell W., Bouhassira, Eric E., Ryan, Michael C., Noble, William S., Aladjem, Mirit I.
Published 2016