TCS: a web server for multiple sequence alignment evaluation and phylogenetic reconstruction
This article introduces the Transitive Consistency Score (TCS) web server; a service making it possible to estimate the local reliability of protein multiple sequence alignments (MSAs) using the TCS index. The evaluation can be used to identify the aligned positions most likely to contain structural...
Main Authors: | Chang, Jia-Ming, Di Tommaso, Paolo, Lefort, Vincent, Gascuel, Olivier, Notredame, Cedric |
---|---|
Format: | Online |
Language: | English |
Published: |
Oxford University Press
2015
|
Online Access: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489230/ |
Similar Items
-
T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension
by: Di Tommaso, Paolo, et al.
Published: (2011) -
T-RMSD: a web server for automated fine-grained protein structural classification
by: Magis, Cedrik, et al.
Published: (2013) -
SARA-Coffee web server, a tool for the computation of RNA sequence and structure multiple alignments
by: Di Tommaso, Paolo, et al.
Published: (2014) -
PSI/TM-Coffee: a web server for fast and accurate multiple sequence alignments of regular and transmembrane proteins using homology extension on reduced databases
by: Floden, Evan W., et al.
Published: (2016) -
The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods
by: Moretti, Sebastien, et al.
Published: (2007)