Sensitivity and specificity of immunoprecipitation of DNA containing 5-Methylcytosine

Sensitivity and specificity of immunoprecipitation of DNA containing 5-Methylcytosine

Bibliographic Details
Main Authors:	Okitsu, Cindy Y, Hsieh, Chih-Lin
Format:	Online
Language:	English
Published:	BioMed Central 2015
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4379710/

Similar Items

5-methylcytosine-sensitive variants of Thermococcus kodakaraensis DNA polymerase
by: Huber, Claudia, et al.
Published: (2016)

Variable presence of 5-methylcytosine in commercial RNA and DNA
by: Schmid, Katharina, et al.
Published: (2015)

Crystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine
by: Renciuk, Daniel, et al.
Published: (2013)

Characterizing 5-methylcytosine in the mammalian epitranscriptome
by: Hussain, Shobbir, et al.
Published: (2013)

Epigenetic regulatory functions of DNA modifications: 5-methylcytosine and beyond
by: Breiling, Achim, et al.
Published: (2015)

Recognition and cleavage of 5-methylcytosine DNA by bacterial SRA-HNH proteins
by: Han, Tiesheng, et al.
Published: (2015)

A Mutant of Uracil DNA Glycosylase That Distinguishes between Cytosine and 5-Methylcytosine
by: Kimber, Scott T., et al.
Published: (2014)

5-Methylcytosine Recognition by Arabidopsis thaliana DNA Glycosylases DEMETER and DML3
by: Brooks, Sonja C., et al.
Published: (2014)

Engineering nicking enzymes that preferentially nick 5-methylcytosine-modified DNA
by: Gutjahr, Alice, et al.
Published: (2014)

Hydroxyl-radical-induced oxidation of 5-methylcytosine in isolated and cellular DNA
by: Madugundu, Guru S., et al.
Published: (2014)

Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNA
by: Hashimoto, Hideharu, et al.
Published: (2013)

Deamination of 5-Methylcytosine Residues in Mammalian Cells
by: Gromenko, E.V., et al.
Published: (2009)

Direct Sensing of 5-Methylcytosine by Polymerase Chain Reaction**
by: Aschenbrenner, Joos, et al.
Published: (2014)

Discovery of a Bacterial 5-Methylcytosine Deaminase
by: Hitchcock, Daniel S., et al.
Published: (2014)

DNA cytosine and methylcytosine deamination by APOBEC3B: enhancing methylcytosine deamination by engineering APOBEC3B
by: Fu, Yang, et al.
Published: (2015)

Global and Site-Specific Changes in 5-Methylcytosine and 5-Hydroxymethylcytosine after Extended Post-mortem Interval
by: Gross, Jeffrey A., et al.
Published: (2016)

Placental 5-methylcytosine and 5-hydroxymethylcytosine patterns associate with size at birth
by: Piyasena, Chinthika, et al.
Published: (2015)

5-Methylcytosine and 5-Hydroxymethylcytosine Spatiotemporal Profiles in the Mouse Zygote
by: Salvaing, Juliette, et al.
Published: (2012)

Dynamics of 5-methylcytosine and 5-hydroxymethylcytosine during germ cell reprogramming
by: Yamaguchi, Shinpei, et al.
Published: (2013)

5′-methylcytosine and 5′-hydroxymethylcytosine Each Provide Epigenetic Information to the Mouse Zygote
by: Li, Yan, et al.
Published: (2013)

Reproducibility and reliability of SNP analysis using human cellular DNA at or near nanogram levels
by: Okitsu, Cindy Y, et al.
Published: (2013)

Fast chromatin immunoprecipitation assay
by: Nelson, Joel D., et al.
Published: (2006)

Accurate Measurement of 5-Methylcytosine and 5-Hydroxymethylcytosine in Human Cerebellum DNA by Oxidative Bisulfite on an Array (OxBS-Array)
by: Field, Sarah F., et al.
Published: (2015)

Association of 5-Methylcytosine and 5-Hydroxymethylcytosine with Mitochondrial DNA Content and Clinical and Biochemical Parameters in Hepatocellular Carcinoma
by: Shen, Fan, et al.
Published: (2013)

TET2 Mutations Are Associated with Specific 5-Methylcytosine and 5-Hydroxymethylcytosine Profiles in Patients with Chronic Myelomonocytic Leukemia
by: Pérez, Cristina, et al.
Published: (2012)

The use of biotin tagging in Saccharomyces cerevisiae improves the sensitivity of chromatin immunoprecipitation
by: van Werven, Folkert J., et al.
Published: (2006)

A Microfluidic Device with Integrated Sonication and Immunoprecipitation for Sensitive Epigenetic Assays
by: Cao, Zhenning, et al.
Published: (2016)

Conservation of tRNA and rRNA 5-methylcytosine in the kingdom Plantae
by: Burgess, Alice Louise, et al.
Published: (2015)

Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA
by: Squires, Jeffrey E., et al.
Published: (2012)

Directionality of point mutation and 5-methylcytosine deamination rates in the chimpanzee genome
by: Jiang, Cizhong, et al.
Published: (2006)

5-Methylcytosine depletion during tumour development: an extension of the miscoding concept.
by: Nyce, J., et al.
Published: (1983)

Modified Nucleotides for Discrimination between Cytosine and the Epigenetic Marker 5‐Methylcytosine
by: von Watzdorf, Janina, et al.
Published: (2016)

Microplate-based platform for combined chromatin and DNA methylation immunoprecipitation assays
by: Yu, Jingjing, et al.
Published: (2011)

Chromatin Immunoprecipitation to Analyze DNA Binding Sites of HMGA2
by: Winter, Nina, et al.
Published: (2011)

Genome-Wide Methylated DNA Immunoprecipitation Analysis of Patients with Polycystic Ovary Syndrome
by: Shen, Hao-ran, et al.
Published: (2013)

Quick, Selective and Reversible Photocrosslinking Reaction between 5-Methylcytosine and 3-Cyanovinylcarbazole in DNA Double Strand
by: Fujimo, Kenzo, et al.
Published: (2013)

Efficient deamination of 5-methylcytosines in DNA by human APOBEC3A, but not by AID or APOBEC3G
by: Wijesinghe, Priyanga, et al.
Published: (2012)

5-Methylcytosine—The Fifth Base of DNA: The Fifth Wheel on a Car or a Highly Promising Diagnostic and Therapeutic Target in Cancer?
by: Widschwendter, Martin
Published: (2007)

Quantitative assessment of Tet-induced oxidation products of 5-methylcytosine in cellular and tissue DNA
by: Liu, Shuo, et al.
Published: (2013)

AP endonucleases process 5-methylcytosine excision intermediates during active DNA demethylation in Arabidopsis
by: Lee, Jiyoon, et al.
Published: (2014)