A pipeline for RNA-seq data processing and quality assessment

A pipeline for RNA-seq data processing and quality assessment

Summary: We present an R based pipeline, ArrayExpressHTS, for pre-processing, expression estimation and data quality assessment of high-throughput sequencing transcriptional profiling (RNA-seq) datasets. The pipeline starts from raw sequence files and produces standard Bioconductor R objects contain...

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Bibliographic Details
Main Authors:	Goncalves, Angela, Tikhonov, Andrew, Brazma, Alvis, Kapushesky, Misha
Format:	Online
Language:	English
Published:	Oxford University Press 2011
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3051320/

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