GeneNotes – A novel information management software for biologists

by Hong, Pengyu, Wong, Wing H
Published 2005

An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse

by Kim, Ryung S, Ji, Hongkai, Wong, Wing H
Published 2006

A comparative analysis of genome-wide chromatin immunoprecipitation data for mammalian transcription factors

by Ji, Hongkai, Vokes, Steven A., Wong, Wing H.
Published 2006

Clustering analysis of SAGE data using a Poisson approach

by Cai, Li, Huang, Haiyan, Blackshaw, Seth, Liu, Jun S, Cepko, Connie, Wong, Wing H
Published 2004

Early role for IL6 signaling in iPS generation revealed by heterokaryon RNA-Seq

by Brady, Jennifer J., Li, Mavis, Suthram, Silpa, Jiang, Hui, Wong, Wing H., Blau, Helen M.
Published 2013

An Oct4-Sall4-Nanog network controls developmental progression in the pre-implantation mouse embryo

by Tan, Meng How, Au, Kin Fai, Leong, Denise E, Foygel, Kira, Wong, Wing H, Yao, Mylene WM
Published 2013

Recursive SVM feature selection and sample classification for mass-spectrometry and microarray data

by Zhang, Xuegong, Lu, Xin, Shi, Qian, Xu, Xiu-qin, Leung, Hon-chiu E, Harris, Lyndsay N, Iglehart, James D, Miron, Alexander, Liu, Jun S, Wong, Wing H
Published 2006

VarSim: a high-fidelity simulation and validation framework for high-throughput genome sequencing with cancer applications

by Mu, John C., Mohiyuddin, Marghoob, Li, Jian, Bani Asadi, Narges, Gerstein, Mark B., Abyzov, Alexej, Wong, Wing H., Lam, Hugo Y.K.
Published 2015

MetaSV: an accurate and integrative structural-variant caller for next generation sequencing

by Mohiyuddin, Marghoob, Mu, John C., Li, Jian, Bani Asadi, Narges, Gerstein, Mark B., Abyzov, Alexej, Wong, Wing H., Lam, Hugo Y.K.
Published 2015

Leveraging long read sequencing from a single individual to provide a comprehensive resource for benchmarking variant calling methods

by Mu, John C., Tootoonchi Afshar, Pegah, Mohiyuddin, Marghoob, Chen, Xi, Li, Jian, Bani Asadi, Narges, Gerstein, Mark B., Wong, Wing H., Lam, Hugo Y. K.
Published 2015

Genomic Analysis of Mouse Retinal Development

by Blackshaw, Seth, Harpavat, Sanjiv, Trimarchi, Jeff, Cai, Li, Huang, Haiyan, Kuo, Winston P, Weber, Griffin, Lee, Kyungjoon, Fraioli, Rebecca E, Cho, Seo-Hee, Yung, Rachel, Asch, Elizabeth, Ohno-Machado, Lucila, Wong, Wing H, Cepko, Constance L
Published 2004

An ensemble approach to accurately detect somatic mutations using SomaticSeq

by Fang, Li Tai, Afshar, Pegah Tootoonchi, Chhibber, Aparna, Mohiyuddin, Marghoob, Fan, Yu, Mu, John C., Gibeling, Greg, Barr, Sharon, Asadi, Narges Bani, Gerstein, Mark B., Koboldt, Daniel C., Wang, Wenyi, Wong, Wing H., Lam, Hugo YK
Published 2015

P53 and Pten control neural and glioma stem/progenitor cell renewal and differentiation

by Zheng, Hongwu, Ying, Haoqiang, Yan, Haiyan, Kimmelman, Alec C., Hiller, David J., Chen, An-Jou, Perry, Samuel R., Tonon, Giovanni, Chu, Gerald C., Ding, Zhihu, Stommel, Jayne M., Dunn, Katherine L., Wiedemeyer, Ruprecht, You, Mingjian J., Brennan, Cameron, Wang, Y. Alan, Ligon, Keith L., Wong, Wing H., Chin, Lynda, DePinho, Ronald A.
Published 2008