Evaluation of Secretion Prediction Highlights Differing Approaches Needed for Oomycete and Fungal Effectors

by Sperschneider, Jana, Williams, Angela H., Hane, James K., Singh, Karam B., Taylor, Jennifer M.
Published 2015

Transcriptome and Complexity-Reduced, DNA-Based Identification of Intraspecies Single-Nucleotide Polymorphisms in the Polyploid Gossypium hirsutum L.

by Zhu, Qian-Hao, Spriggs, Andrew, Taylor, Jennifer M., Llewellyn, Danny, Wilson, Iain
Published 2014

A Genome-Wide Survey of Imprinted Genes in Rice Seeds Reveals Imprinting Primarily Occurs in the Endosperm

by Luo, Ming, Taylor, Jennifer M., Spriggs, Andrew, Zhang, Hongyu, Wu, Xianjun, Russell, Scott, Singh, Mohan, Koltunow, Anna
Published 2011

Efficient experimental design and analysis strategies for the detection of differential expression using RNA-Sequencing

by Robles, José A, Qureshi, Sumaira E, Stephen, Stuart J, Wilson, Susan R, Burden, Conrad J, Taylor, Jennifer M
Published 2012

A comparative hidden Markov model analysis pipeline identifies proteins characteristic of cereal-infecting fungi

by Sperschneider, Jana, Gardiner, Donald M, Taylor, Jennifer M, Hane, James K, Singh, Karam B, Manners, John M
Published 2013

Genome-Wide Analysis in Three Fusarium Pathogens Identifies Rapidly Evolving Chromosomes and Genes Associated with Pathogenicity

by Sperschneider, Jana, Gardiner, Donald M., Thatcher, Louise F., Lyons, Rebecca, Singh, Karam B., Manners, John M., Taylor, Jennifer M.
Published 2015

Advances and Challenges in Computational Prediction of Effectors from Plant Pathogenic Fungi

by Sperschneider, Jana, Dodds, Peter N., Gardiner, Donald M., Manners, John M., Singh, Karam B., Taylor, Jennifer M.
Published 2015

QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data

by Colella, Stefano, Yau, Christopher, Taylor, Jennifer M., Mirza, Ghazala, Butler, Helen, Clouston, Penny, Bassett, Anne S., Seller, Anneke, Holmes, Christopher C., Ragoussis, Jiannis
Published 2007

Advanced Engineering of Lipid Metabolism in Nicotiana benthamiana Using a Draft Genome and the V2 Viral Silencing-Suppressor Protein

by Naim, Fatima, Nakasugi, Kenlee, Crowhurst, Ross N., Hilario, Elena, Zwart, Alexander B., Hellens, Roger P., Taylor, Jennifer M., Waterhouse, Peter M., Wood, Craig C.
Published 2012

Molecular and cellular characteristics of hybrid vigour in a commercial hybrid of Chinese cabbage

by Saeki, Natsumi, Kawanabe, Takahiro, Ying, Hua, Shimizu, Motoki, Kojima, Mikiko, Abe, Hiroshi, Okazaki, Keiichi, Kaji, Makoto, Taylor, Jennifer M., Sakakibara, Hitoshi, Peacock, W. James, Dennis, Elizabeth S., Fujimoto, Ryo
Published 2016

Diversifying selection in the wheat stem rust fungus acts predominantly on pathogen-associated gene families and reveals candidate effectors

by Sperschneider, Jana, Ying, Hua, Dodds, Peter N., Gardiner, Donald M., Upadhyaya, Narayana M., Singh, Karam B., Manners, John M., Taylor, Jennifer M.
Published 2014

Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

by Rabiger, David S., Taylor, Jennifer M., Spriggs, Andrew, Hand, Melanie L., Henderson, Steven T., Johnson, Susan D., Oelkers, Karsten, Hrmova, Maria, Saito, Keisuke, Suzuki, Go, Mukai, Yasuhiko, Carroll, Bernard J., Koltunow, Anna M. G.
Published 2016

Total Psoas Area Predicts Complications following Radical Cystectomy

by Lyon, Timothy D., Farber, Nicholas J., Chen, Leo C., Fuller, Thomas W., Davies, Benjamin J., Gingrich, Jeffrey R., Hrebinko, Ronald L., Maranchie, Jodi K., Taylor, Jennifer M., Tarin, Tatum V.
Published 2015

DNA demethylases target promoter transposable elements to positively regulate stress responsive genes in Arabidopsis

by Le, Tuan-Ngoc, Schumann, Ulrike, Smith, Neil A, Tiwari, Sameer, Au, Phil Chi Khang, Zhu, Qian-Hao, Taylor, Jennifer M, Kazan, Kemal, Llewellyn, Danny J, Zhang, Ren, Dennis, Elizabeth S, Wang, Ming-Bo
Published 2014

The Use of Genome-Wide eQTL Associations in Lymphoblastoid Cell Lines to Identify Novel Genetic Pathways Involved in Complex Traits

by Min, Josine L., Taylor, Jennifer M., Richards, J. Brent, Watts, Tim, Pettersson, Fredrik H., Broxholme, John, Ahmadi, Kourosh R., Surdulescu, Gabriela L., Lowy, Ernesto, Gieger, Christian, Newton-Cheh, Chris, Perola, Markus, Soranzo, Nicole, Surakka, Ida, Lindgren, Cecilia M., Ragoussis, Jiannis, Morris, Andrew P., Cardon, Lon R., Spector, Tim D., Zondervan, Krina T.
Published 2011

Foxp2 Regulates Gene Networks Implicated in Neurite Outgrowth in the Developing Brain

by Vernes, Sonja C., Oliver, Peter L., Spiteri, Elizabeth, Lockstone, Helen E., Puliyadi, Rathi, Taylor, Jennifer M., Ho, Joses, Mombereau, Cedric, Brewer, Ariel, Lowy, Ernesto, Nicod, Jérôme, Groszer, Matthias, Baban, Dilair, Sahgal, Natasha, Cazier, Jean-Baptiste, Ragoussis, Jiannis, Davies, Kay E., Geschwind, Daniel H., Fisher, Simon E.
Published 2011