A simulator for spatially extended kappa models

by Sorokina, Oksana, Sorokin, Anatoly, Douglas Armstrong, J., Danos, Vincent
Published 2013

Meeting report from the first meetings of the Computational Modeling in Biology Network (COMBINE)

by Le Novère, Nicolas, Hucka, Michael, Anwar, Nadia, Bader, Gary D, Demir, Emek, Moodie, Stuart, Sorokin, Anatoly
Published 2011

The Edinburgh human metabolic network reconstruction and its functional analysis

by Ma, Hongwu, Sorokin, Anatoly, Mazein, Alexander, Selkov, Alex, Selkov, Evgeni, Demin, Oleg, Goryanin, Igor
Published 2007

Microarray data can predict diurnal changes of starch content in the picoalga Ostreococcus

by Sorokina, Oksana, Corellou, Florence, Dauvillée, David, Sorokin, Anatoly, Goryanin, Igor, Ball, Steven, Bouget, François-Yves, Millar, Andrew J
Published 2011

Model-based global sensitivity analysis as applied to identification of anti-cancer drug targets and biomarkers of drug resistance in the ErbB2/3 network

by Lebedeva, Galina, Sorokin, Anatoly, Faratian, Dana, Mullen, Peter, Goltsov, Alexey, Langdon, Simon P., Harrison, David J., Goryanin, Igor
Published 2012

SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology

by Adams, Richard, Clark, Allan, Yamaguchi, Azusa, Hanlon, Neil, Tsorman, Nikos, Ali, Shakir, Lebedeva, Galina, Goltsov, Alexey, Sorokin, Anatoly, Akman, Ozgur E., Troein, Carl, Millar, Andrew J., Goryanin, Igor, Gilmore, Stephen
Published 2013

Software support for SBGN maps: SBGN-ML and LibSBGN

by van Iersel, Martijn P., Villéger, Alice C., Czauderna, Tobias, Boyd, Sarah E., Bergmann, Frank T., Luna, Augustin, Demir, Emek, Sorokin, Anatoly, Dogrusoz, Ugur, Matsuoka, Yukiko, Funahashi, Akira, Aladjem, Mirit I., Mi, Huaiyu, Moodie, Stuart L., Kitano, Hiroaki, Le Novère, Nicolas, Schreiber, Falk
Published 2012