A comprehensive pathway map of epidermal growth factor receptor signaling

by Oda, Kanae, Matsuoka, Yukiko, Funahashi, Akira, Kitano, Hiroaki
Published 2005

CTen: a web-based platform for identifying enriched cell types from heterogeneous microarray data

by Shoemaker, Jason E, Lopes, Tiago JS, Ghosh, Samik, Matsuoka, Yukiko, Kawaoka, Yoshihiro, Kitano, Hiroaki
Published 2012

Identifying problematic drugs based on the characteristics of their targets

by Lopes, Tiago J. S., Shoemaker, Jason E., Matsuoka, Yukiko, Kawaoka, Yoshihiro, Kitano, Hiroaki
Published 2015

systemsDock: a web server for network pharmacology-based prediction and analysis

by Hsin, Kun-Yi, Matsuoka, Yukiko, Asai, Yoshiyuki, Kamiyoshi, Kyota, Watanabe, Tokiko, Kawaoka, Yoshihiro, Kitano, Hiroaki
Published 2016

Toward an integrated software platform for systems pharmacology

by Ghosh, Samik, Matsuoka, Yukiko, Asai, Yoshiyuki, Hsin, Kun-Yi, Kitano, Hiroaki
Published 2013

AlzPathway: a comprehensive map of signaling pathways of Alzheimer’s disease

by Mizuno, Satoshi, Iijima, Risa, Ogishima, Soichi, Kikuchi, Masataka, Matsuoka, Yukiko, Ghosh, Samik, Miyamoto, Tadashi, Miyashita, Akinori, Kuwano, Ryozo, Tanaka, Hiroshi
Published 2012

Integrated network analysis reveals a novel role for the cell cycle in 2009 pandemic influenza virus-induced inflammation in macaque lungs

by Shoemaker, Jason E, Fukuyama, Satoshi, Eisfeld, Amie J, Muramoto, Yukiko, Watanabe, Shinji, Watanabe, Tokiko, Matsuoka, Yukiko, Kitano, Hiroaki, Kawaoka, Yoshihiro
Published 2012

Adding Protein Context to the Human Protein-Protein Interaction Network to Reveal Meaningful Interactions

by Schaefer, Martin H., Lopes, Tiago J. S., Mah, Nancy, Shoemaker, Jason E., Matsuoka, Yukiko, Fontaine, Jean-Fred, Louis-Jeune, Caroline, Eisfeld, Amie J., Neumann, Gabriele, Perez-Iratxeta, Carol, Kawaoka, Yoshihiro, Kitano, Hiroaki, Andrade-Navarro, Miguel A.
Published 2013

A comprehensive map of the influenza A virus replication cycle

by Matsuoka, Yukiko, Matsumae, Hiromi, Katoh, Manami, Eisfeld, Amie J, Neumann, Gabriele, Hase, Takeshi, Ghosh, Samik, Shoemaker, Jason E, Lopes, Tiago JS, Watanabe, Tokiko, Watanabe, Shinji, Fukuyama, Satoshi, Kitano, Hiroaki, Kawaoka, Yoshihiro
Published 2013

An Ultrasensitive Mechanism Regulates Influenza Virus-Induced Inflammation

by Shoemaker, Jason E., Fukuyama, Satoshi, Eisfeld, Amie J., Zhao, Dongming, Kawakami, Eiryo, Sakabe, Saori, Maemura, Tadashi, Gorai, Takeo, Katsura, Hiroaki, Muramoto, Yukiko, Watanabe, Shinji, Watanabe, Tokiko, Fuji, Ken, Matsuoka, Yukiko, Kitano, Hiroaki, Kawaoka, Yoshihiro
Published 2015

Software support for SBGN maps: SBGN-ML and LibSBGN

by van Iersel, Martijn P., Villéger, Alice C., Czauderna, Tobias, Boyd, Sarah E., Bergmann, Frank T., Luna, Augustin, Demir, Emek, Sorokin, Anatoly, Dogrusoz, Ugur, Matsuoka, Yukiko, Funahashi, Akira, Aladjem, Mirit I., Mi, Huaiyu, Moodie, Stuart L., Kitano, Hiroaki, Le Novère, Nicolas, Schreiber, Falk
Published 2012

Integrating Pathways of Parkinson's Disease in a Molecular Interaction Map

by Fujita, Kazuhiro A., Ostaszewski, Marek, Matsuoka, Yukiko, Ghosh, Samik, Glaab, Enrico, Trefois, Christophe, Crespo, Isaac, Perumal, Thanneer M., Jurkowski, Wiktor, Antony, Paul M. A., Diederich, Nico, Buttini, Manuel, Kodama, Akihiko, Satagopam, Venkata P., Eifes, Serge, del Sol, Antonio, Schneider, Reinhard, Kitano, Hiroaki, Balling, Rudi
Published 2013