Bacterial epidemiology and biology - lessons from genome sequencing

by Parkhill, Julian, Wren, Brendan W
Published 2011

Genomic perspectives on the evolution and spread of bacterial pathogens

by Bentley, Stephen D., Parkhill, Julian
Published 2015

Draft Genome Sequence of 24570, the Type Strain of Shigella flexneri

by Baker, Kate S., Parkhill, Julian, Thomson, Nicholas R.
Published 2015

Genome flexibility in Neisseria meningitidis

by Schoen, Christoph, Tettelin, Hervé, Parkhill, Julian, Frosch, Matthias
Published 2009

Limited impact of adolescent meningococcal ACWY vaccination on Neisseria meningitides serogroup W carriage in university students

by Oldfield, Neil J., Green, Luke R., Parkhill, Julian, Bayliss, Christopher D., Turner, David P.J.
Published 2018

Detecting SNPs and estimating allele frequencies in clonal bacterial populations by sequencing pooled DNA

by Holt, Kathryn E., Teo, Yik Y., Li, Heng, Nair, Satheesh, Dougan, Gordon, Wain, John, Parkhill, Julian
Published 2009

Phylogenetic Relationships of the Wolbachia of Nematodes and Arthropods

by Fenn, Katelyn, Conlon, Claire, Jones, Martin, Quail, Michael A, Holroyd, Nancy E, Parkhill, Julian, Blaxter, Mark
Published 2006

Re-annotation and re-analysis of the Campylobacter jejuni NCTC11168 genome sequence

by Gundogdu, Ozan, Bentley, Stephen D, Holden, Matt T, Parkhill, Julian, Dorrell, Nick, Wren, Brendan W
Published 2007

Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental data

by Carver, Tim, Harris, Simon R., Berriman, Matthew, Parkhill, Julian, McQuillan, Jacqueline A.
Published 2012

A High-Resolution View of Genome-Wide Pneumococcal Transformation

by Croucher, Nicholas J., Harris, Simon R., Barquist, Lars, Parkhill, Julian, Bentley, Stephen D.
Published 2012

Patent Human Infections with the Whipworm, Trichuris trichiura, Are Not Associated with Alterations in the Faecal Microbiota

by Cooper, Philip, Walker, Alan W., Reyes, Jorge, Chico, Martha, Salter, Susannah J., Vaca, Maritza, Parkhill, Julian
Published 2013

Investigations into genome diversity of Haemophilus influenzae using whole genome sequencing of clinical isolates and laboratory transformants

by Power, Peter M, Bentley, Stephen D, Parkhill, Julian, Moxon, E Richard, Hood, Derek W
Published 2012

BamView: visualizing and interpretation of next-generation sequencing read alignments

by Carver, Tim, Harris, Simon R., Otto, Thomas D., Berriman, Matthew, Parkhill, Julian, McQuillan, Jacqueline A.
Published 2013

Co-cultivation and transcriptome sequencing of two co-existing fish pathogens Moritella viscosa and Aliivibrio wodanis

by Hjerde, Erik, Karlsen, Christian, Sørum, Henning, Parkhill, Julian, Willassen, Nils Peder, Thomson, Nicholas R.
Published 2015

Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification

by Wagner, Josef, Coupland, Paul, Browne, Hilary P., Lawley, Trevor D., Francis, Suzanna C., Parkhill, Julian
Published 2016

Whole Genome Sequence Analysis of a Large Isoniazid-Resistant Tuberculosis Outbreak in London: A Retrospective Observational Study

by Casali, Nicola, Broda, Agnieszka, Harris, Simon R., Parkhill, Julian, Brown, Timothy, Drobniewski, Francis
Published 2016

Circlator: automated circularization of genome assemblies using long sequencing reads

by Hunt, Martin, Silva, Nishadi De, Otto, Thomas D., Parkhill, Julian, Keane, Jacqueline A., Harris, Simon R.
Published 2015

Early insights into the potential of the Oxford Nanopore MinION for the detection of antimicrobial resistance genes

by Judge, Kim, Harris, Simon R., Reuter, Sandra, Parkhill, Julian, Peacock, Sharon J.
Published 2015

Draft Genome Sequence of the Streptococcus pneumoniae Avery Strain A66

by Hahn, Christoph, Harrison, Ewan M., Parkhill, Julian, Holmes, Mark A., Paterson, Gavin K.
Published 2015

16S rRNA gene-based profiling of the human infant gut microbiota is strongly influenced by sample processing and PCR primer choice

by Walker, Alan W., Martin, Jennifer C., Scott, Paul, Parkhill, Julian, Flint, Harry J., Scott, Karen P.
Published 2015