EXTRACT: interactive extraction of environment metadata and term suggestion for metagenomic sample annotation

by Pafilis, Evangelos, Buttigieg, Pier Luigi, Ferrell, Barbra, Pereira, Emiliano, Schnetzer, Julia, Arvanitidis, Christos, Jensen, Lars Juhl
Published 2016

The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text

by Pafilis, Evangelos, Frankild, Sune P., Fanini, Lucia, Faulwetter, Sarah, Pavloudi, Christina, Vasileiadou, Aikaterini, Arvanitidis, Christos, Jensen, Lars Juhl
Published 2013

The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation

by Buttigieg, Pier Luigi, Pafilis, Evangelos, Lewis, Suzanna E., Schildhauer, Mark P., Walls, Ramona L., Mungall, Christopher J.
Published 2016

Polytraits: A database on biological traits of marine polychaetes

by Faulwetter, Sarah, Markantonatou, Vasiliki, Pavloudi, Christina, Papageorgiou, Nafsika, Keklikoglou, Kleoniki, Chatzinikolaou, Eva, Pafilis, Evangelos, Chatzigeorgiou, Georgios, Vasileiadou, Katerina, Dailianis, Thanos, Fanini, Lucia, Koulouri, Panayota, Arvanitidis, Christos
Published 2014

Environmental variability and heavy metal concentrations from five lagoons in the Ionian Sea (Amvrakikos Gulf, W Greece)

by Vasileiadou, Katerina, Pavloudi, Christina, Kalantzi, Ioanna, Apostolaki, Eugenia T., Chatzigeorgiou, Giorgos, Chatzinikolaou, Eva, Pafilis, Evangelos, Papageorgiou, Nafsika, Fanini, Lucia, Konstas, Spyridon, Fragopoulou, Nina, Arvanitidis, Christos
Published 2016

Engaging the broader community in biodiversity research: the concept of the COMBER pilot project for divers in ViBRANT

by Arvanitidis, Christos, Faulwetter, Sarah, Chatzigeorgiou, Georgios, Penev, Lyubomir, Bánki, Olaf, Dailianis, Thanos, Pafilis, Evangelos, Kouratoras, Michail, Chatzinikolaou, Eva, Fanini, Lucia, Vasileiadou, Aikaterini, Pavloudi, Christina, Vavilis, Panagiotis, Koulouri, Panayota, Dounas, Costas
Published 2011

Seqenv: linking sequences to environments through text mining

by Sinclair, Lucas, Ijaz, Umer Z., Jensen, Lars Juhl, Coolen, Marco J.L., Gubry-Rangin, Cecile, Chroňáková, Alica, Oulas, Anastasis, Pavloudi, Christina, Schnetzer, Julia, Weimann, Aaron, Ijaz, Ali, Eiler, Alexander, Quince, Christopher, Pafilis, Evangelos
Published 2016

Optimized R functions for analysis of ecological community data using the R virtual laboratory (RvLab)

by Varsos, Constantinos, Patkos, Theodore, Oulas, Anastasis, Pavloudi, Christina, Gougousis, Alexandros, Ijaz, Umer Zeeshan, Filiopoulou, Irene, Pattakos, Nikolaos, Vanden Berghe, Edward, Fernández-Guerra, Antonio, Faulwetter, Sarah, Chatzinikolaou, Eva, Pafilis, Evangelos, Bekiari, Chryssoula, Doerr, Martin, Arvanitidis, Christos
Published 2016

ENVIRONMENTS and EOL: identification of Environment Ontology terms in text and the annotation of the Encyclopedia of Life

by Pafilis, Evangelos, Frankild, Sune P., Schnetzer, Julia, Fanini, Lucia, Faulwetter, Sarah, Pavloudi, Christina, Vasileiadou, Katerina, Leary, Patrick, Hammock, Jennifer, Schulz, Katja, Parr, Cynthia Sims, Arvanitidis, Christos, Jensen, Lars Juhl
Published 2015

Value, but high costs in post-deposition data curation

by ten Hoopen, Petra, Amid, Clara, Luigi Buttigieg, Pier, Pafilis, Evangelos, Bravakos, Panos, Cerdeño-Tárraga, Ana M., Gibson, Richard, Kahlke, Tim, Legaki, Aglaia, Narayana Murthy, Kada, Papastefanou, Gabriella, Pereira, Emiliano, Rossello, Marc, Luisa Toribio, Ana, Cochrane, Guy
Published 2016

Overview of the interactive task in BioCreative V

by Wang, Qinghua, S. Abdul, Shabbir, Almeida, Lara, Ananiadou, Sophia, Balderas-Martínez, Yalbi I., Batista-Navarro, Riza, Campos, David, Chilton, Lucy, Chou, Hui-Jou, Contreras, Gabriela, Cooper, Laurel, Dai, Hong-Jie, Ferrell, Barbra, Fluck, Juliane, Gama-Castro, Socorro, George, Nancy, Gkoutos, Georgios, Irin, Afroza K., Jensen, Lars J., Jimenez, Silvia, Jue, Toni R., Keseler, Ingrid, Madan, Sumit, Matos, Sérgio, McQuilton, Peter, Milacic, Marija, Mort, Matthew, Natarajan, Jeyakumar, Pafilis, Evangelos, Pereira, Emiliano, Rao, Shruti, Rinaldi, Fabio, Rothfels, Karen, Salgado, David, Silva, Raquel M., Singh, Onkar, Stefancsik, Raymund, Su, Chu-Hsien, Subramani, Suresh, Tadepally, Hamsa D., Tsaprouni, Loukia, Vasilevsky, Nicole, Wang, Xiaodong, Chatr-Aryamontri, Andrew, Laulederkind, Stanley J. F., Matis-Mitchell, Sherri, McEntyre, Johanna, Orchard, Sandra, Pundir, Sangya, Rodriguez-Esteban, Raul, Van Auken, Kimberly, Lu, Zhiyong, Schaeffer, Mary, Wu, Cathy H., Hirschman, Lynette, Arighi, Cecilia N.
Published 2016

The founding charter of the Genomic Observatories Network

by Davies, Neil, Field, Dawn, Amaral-Zettler, Linda, Clark, Melody S, Deck, John, Drummond, Alexei, Faith, Daniel P, Geller, Jonathan, Gilbert, Jack, Glöckner, Frank Oliver, Hirsch, Penny R, Leong, Jo-Ann, Meyer, Chris, Obst, Matthias, Planes, Serge, Scholin, Chris, Vogler, Alfried P, Gates, Ruth D, Toonen, Rob, Berteaux-Lecellier, Véronique, Barbier, Michèle, Barker, Katherine, Bertilsson, Stefan, Bicak, Mesude, Bietz, Matthew J, Bobe, Jason, Bodrossy, Levente, Borja, Angel, Coddington, Jonathan, Fuhrman, Jed, Gerdts, Gunnar, Gillespie, Rosemary, Goodwin, Kelly, Hanson, Paul C, Hero, Jean-Marc, Hoekman, David, Jansson, Janet, Jeanthon, Christian, Kao, Rebecca, Klindworth, Anna, Knight, Rob, Kottmann, Renzo, Koo, Michelle S, Kotoulas, Georgios, Lowe, Andrew J, Marteinsson, Viggó Thór, Meyer, Folker, Morrison, Norman, Myrold, David D, Pafilis, Evangelos, Parker, Stephanie, Parnell, John Jacob, Polymenakou, Paraskevi N, Ratnasingham, Sujeevan, Roderick, George K, Rodriguez-Ezpeleta, Naiara, Schonrogge, Karsten, Simon, Nathalie, Valette-Silver, Nathalie J, Springer, Yuri P, Stone, Graham N, Stones-Havas, Steve, Sansone, Susanna-Assunta, Thibault, Kate M, Wecker, Patricia, Wichels, Antje, Wooley, John C, Yahara, Tetsukazu, Zingone, Adriana
Published 2014