QuorUM: An Error Corrector for Illumina Reads

by Marçais, Guillaume, Yorke, James A., Zimin, Aleksey
Published 2015

Mis-Assembled “Segmental Duplications” in Two Versions of the Bos taurus Genome

by Zimin, Aleksey V., Kelley, David R., Roberts, Michael, Marçais, Guillaume, Salzberg, Steven L., Yorke, James A.
Published 2012

Parsimonious reconstruction of network evolution

by Patro, Rob, Sefer, Emre, Malin, Justin, Marçais, Guillaume, Navlakha, Saket, Kingsford, Carl
Published 2012

Sequencing and Assembly of the 22-Gb Loblolly Pine Genome

by Zimin, Aleksey, Stevens, Kristian A., Crepeau, Marc W., Holtz-Morris, Ann, Koriabine, Maxim, Marçais, Guillaume, Puiu, Daniela, Roberts, Michael, Wegrzyn, Jill L., de Jong, Pieter J., Neale, David B., Salzberg, Steven L., Yorke, James A., Langley, Charles H.
Published 2014

A new rhesus macaque assembly and annotation for next-generation sequencing analyses

by Zimin, Aleksey V, Cornish, Adam S, Maudhoo, Mnirnal D, Gibbs, Robert M, Zhang, Xiongfei, Pandey, Sanjit, Meehan, Daniel T, Wipfler, Kristin, Bosinger, Steven E, Johnson, Zachary P, Tharp, Gregory K, Marçais, Guillaume, Roberts, Michael, Ferguson, Betsy, Fox, Howard S, Treangen, Todd, Salzberg, Steven L, Yorke, James A, Norgren,, Robert B
Published 2014

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

by Neale, David B, Wegrzyn, Jill L, Stevens, Kristian A, Zimin, Aleksey V, Puiu, Daniela, Crepeau, Marc W, Cardeno, Charis, Koriabine, Maxim, Holtz-Morris, Ann E, Liechty, John D, Martínez-García, Pedro J, Vasquez-Gross, Hans A, Lin, Brian Y, Zieve, Jacob J, Dougherty, William M, Fuentes-Soriano, Sara, Wu, Le-Shin, Gilbert, Don, Marçais, Guillaume, Roberts, Michael, Holt, Carson, Yandell, Mark, Davis, John M, Smith, Katherine E, Dean, Jeffrey FD, Lorenz, W Walter, Whetten, Ross W, Sederoff, Ronald, Wheeler, Nicholas, McGuire, Patrick E, Main, Doreen, Loopstra, Carol A, Mockaitis, Keithanne, deJong, Pieter J, Yorke, James A, Salzberg, Steven L, Langley, Charles H
Published 2014