Early Relaxation Dynamics in the LC 13 T Cell Receptor in Reaction to 172 Altered Peptide Ligands: A Molecular Dynamics Simulation Study

by Knapp, Bernhard, Dorffner, Georg, Schreiner, Wolfgang
Published 2013

Large Scale Characterization of the LC13 TCR and HLA-B8 Structural Landscape in Reaction to 172 Altered Peptide Ligands: A Molecular Dynamics Simulation Study

by Knapp, Bernhard, Dunbar, James, Deane, Charlotte M.
Published 2014

PeptX: Using Genetic Algorithms to optimize peptides for MHC binding

by Knapp, Bernhard, Giczi, Verena, Ribarics, Reiner, Schreiner, Wolfgang
Published 2011

Relaxation Estimation of RMSD in Molecular Dynamics Immunosimulations

by Schreiner, Wolfgang, Karch, Rudolf, Knapp, Bernhard, Ilieva, Nevena
Published 2012

Exploring peptide/MHC detachment processes using hierarchical natural move Monte Carlo

by Knapp, Bernhard, Demharter, Samuel, Deane, Charlotte M., Minary, Peter
Published 2016

Differential Geometric Analysis of Alterations in MH α-Helices

by Hischenhuber, Birgit, Havlicek, Hans, Todoric, Jelena, Höllrigl-Binder, Sonja, Schreiner, Wolfgang, Knapp, Bernhard
Published 2013

Progress and challenges in predicting protein interfaces

by Esmaielbeiki, Reyhaneh, Krawczyk, Konrad, Knapp, Bernhard, Nebel, Jean-Christophe, Deane, Charlotte M.
Published 2016

Examining Variable Domain Orientations in Antigen Receptors Gives Insight into TCR-Like Antibody Design

by Dunbar, James, Knapp, Bernhard, Fuchs, Angelika, Shi, Jiye, Deane, Charlotte M.
Published 2014

Association of HLA-DR1 with the allergic response to the major mugwort pollen allergen: molecular background

by Knapp, Bernhard, Fischer, Gottfried, Van Hemelen, Dries, Fae, Ingrid, Maillere, Bernard, Ebner, Christof, Schreiner, Wolfgang, Bohle, Barbara, Jahn-Schmid, Beatrice
Published 2012

The Sedoheptulose Kinase CARKL Directs Macrophage Polarization through Control of Glucose Metabolism

by Haschemi, Arvand, Kosma, Paul, Gille, Lars, Evans, Charles R., Burant, Charles F., Starkl, Philipp, Knapp, Bernhard, Haas, Robert, Schmid, Johannes A., Jandl, Christoph, Amir, Shahzada, Lubec, Gert, Park, Jaehong, Esterbauer, Harald, Bilban, Martin, Brizuela, Leonardo, Pospisilik, J. Andrew, Otterbein, Leo E., Wagner, Oswald
Published 2012

Ten Simple Rules for Effective Computational Research

by Osborne, James M., Bernabeu, Miguel O., Bruna, Maria, Calderhead, Ben, Cooper, Jonathan, Dalchau, Neil, Dunn, Sara-Jane, Fletcher, Alexander G., Freeman, Robin, Groen, Derek, Knapp, Bernhard, McInerny, Greg J., Mirams, Gary R., Pitt-Francis, Joe, Sengupta, Biswa, Wright, David W., Yates, Christian A., Gavaghan, David J., Emmott, Stephen, Deane, Charlotte
Published 2014

Ten Simple Rules for a Successful Cross-Disciplinary Collaboration

by Knapp, Bernhard, Bardenet, Rémi, Bernabeu, Miguel O., Bordas, Rafel, Bruna, Maria, Calderhead, Ben, Cooper, Jonathan, Fletcher, Alexander G., Groen, Derek, Kuijper, Bram, Lewis, Joanna, McInerny, Greg, Minssen, Timo, Osborne, James, Paulitschke, Verena, Pitt-Francis, Joe, Todoric, Jelena, Yates, Christian A., Gavaghan, David, Deane, Charlotte M.
Published 2015