Fitness Inference from Short-Read Data: Within-Host Evolution of a Reassortant H5N1 Influenza Virus

by Illingworth, Christopher J.R.
Published 2015

Distinguishing Driver and Passenger Mutations in an Evolutionary History Categorized by Interference

by Illingworth, Christopher J. R., Mustonen, Ville
Published 2011

A method to infer positive selection from marker dynamics in an asexual population

by Illingworth, Christopher J. R., Mustonen, Ville
Published 2012

Components of Selection in the Evolution of the Influenza Virus: Linkage Effects Beat Inherent Selection

by Illingworth, Christopher J. R., Mustonen, Ville
Published 2012

Identifying Selection in the Within-Host Evolution of Influenza Using Viral Sequence Data

by Illingworth, Christopher J. R., Fischer, Andrej, Mustonen, Ville
Published 2014

Inferring Genome-Wide Recombination Landscapes from Advanced Intercross Lines: Application to Yeast Crosses

by Illingworth, Christopher J. R., Parts, Leopold, Bergström, Anders, Liti, Gianni, Mustonen, Ville
Published 2013

Quantifying Selection Acting on a Complex Trait Using Allele Frequency Time Series Data

by Illingworth, Christopher J.R., Parts, Leopold, Schiffels, Stephan, Liti, Gianni, Mustonen, Ville
Published 2012

High-Definition Reconstruction of Clonal Composition in Cancer

by Fischer, Andrej, Vázquez-García, Ignacio, Illingworth, Christopher J.R., Mustonen, Ville
Published 2014

Addicted? Reduced host resistance in populations with defensive symbionts

by Martinez, Julien, Cogni, Rodrigo, Cao, Chuan, Smith, Sophie, Illingworth, Christopher J. R., Jiggins, Francis M.
Published 2016

Assessing the effect of dynamics on the closed-loop protein-folding hypothesis

by Chintapalli, Sree V., Illingworth, Christopher J. R., Upton, Graham J. G., Sacquin-Mora, Sophie, Reeves, Philip J., Mohammedali, Hani S., Reynolds, Christopher A.
Published 2014