Type I interferon receptor-independent and -dependent host transcriptional responses to mouse hepatitis coronavirus infection in vivo

by Raaben, Matthijs, Groot Koerkamp, Marian JA, Rottier, Peter JM, de Haan, Cornelis AM
Published 2009

E2F7 represses a network of oscillating cell cycle genes to control S-phase progression

by Westendorp, Bart, Mokry, Michal, Groot Koerkamp, Marian J.A., Holstege, Frank C.P., Cuppen, Edwin, de Bruin, Alain
Published 2012

Amygdala 14-3-3ζ as a Novel Modulator of Escalating Alcohol Intake in Mice

by Lesscher, Heidi M. B., Houthuijzen, Julia M., Groot Koerkamp, Marian J., Holstege, Frank C. P., Vanderschuren, Louk J. M. J.
Published 2012

Caenorhabditis elegans Cyclin D/CDK4 and Cyclin E/CDK2 Induce Distinct Cell Cycle Re-Entry Programs in Differentiated Muscle Cells

by Korzelius, Jerome, The, Inge, Ruijtenberg, Suzan, Prinsen, Martine B. W., Portegijs, Vincent, Middelkoop, Teije C., Groot Koerkamp, Marian J., Holstege, Frank C. P., Boxem, Mike, van den Heuvel, Sander
Published 2011

Genome wide expression profiling of the mesodiencephalic region identifies novel factors involved in early and late dopaminergic development

by Chakrabarty, Koushik, Von Oerthel, Lars, Hellemons, Anita, Clotman, Frédéric, Espana, Agnès, Groot Koerkamp, Marian, Holstege, Frank C. P., Pasterkamp, R. Jeroen, Smidt, Marten P.
Published 2012

The Two Main Forms of Histiocytic Sarcoma in the Predisposed Flatcoated Retriever Dog Display Variation in Gene Expression

by Boerkamp, Kim M., van Steenbeek, Frank G., Penning, Louis C., Groot Koerkamp, Marian J. A., van Leenen, Dik, Vos-Loohuis, Manon, Grinwis, Guy C. M., Rutteman, Gerard R.
Published 2014

A mRNA landscape of bovine embryos after standard and MAPK-inhibited culture conditions: a comparative analysis

by Brinkhof, Bas, van Tol, Helena TA, Groot Koerkamp, Marian JA, Riemers, Frank M, IJzer, Sascha G, Mashayekhi, Kaveh, Haagsman, Henk P, Roelen, Bernard AJ
Published 2015

Cell cycle population effects in perturbation studies

by O'Duibhir, Eoghan, Lijnzaad, Philip, Benschop, Joris J, Lenstra, Tineke L, van Leenen, Dik, Groot Koerkamp, Marian JA, Margaritis, Thanasis, Brok, Mariel O, Kemmeren, Patrick, Holstege, Frank CP
Published 2014

Gene Expression Profiling of Histiocytic Sarcomas in a Canine Model: The Predisposed Flatcoated Retriever Dog

by Boerkamp, Kim M., van der Kooij, Marieke, van Steenbeek, Frank G., van Wolferen, Monique E., Groot Koerkamp, Marian J. A., van Leenen, Dik, Grinwis, Guy C. M., Penning, Louis C., Wiemer, Erik A. C., Rutteman, Gerard R.
Published 2013

Detailed Analysis of the Genetic and Epigenetic Signatures of iPSC-Derived Mesodiencephalic Dopaminergic Neurons

by Roessler, Reinhard, Smallwood, Sebastien A., Veenvliet, Jesse V., Pechlivanoglou, Petros, Peng, Su-Ping, Chakrabarty, Koushik, Groot-Koerkamp, Marian J.A., Pasterkamp, R. Jeroen, Wesseling, Evelyn, Kelsey, Gavin, Boddeke, Erik, Smidt, Marten P., Copray, Sjef
Published 2014

Aberrant Expression and Distribution of Enzymes of the Urea Cycle and Other Ammonia Metabolizing Pathways in Dogs with Congenital Portosystemic Shunts

by van Straten, Giora, van Steenbeek, Frank G., Grinwis, Guy C. M., Favier, Robert P., Kummeling, Anne, van Gils, Ingrid H., Fieten, Hille, Groot Koerkamp, Marian J. A., Holstege, Frank C. P., Rothuizen, Jan, Spee, Bart
Published 2014

Genome-wide analysis reveals NRP1 as a direct HIF1α-E2F7 target in the regulation of motorneuron guidance in vivo

by de Bruin, Alain, A. Cornelissen, Peter W., Kirchmaier, Bettina C., Mokry, Michal, Iich, Elhadi, Nirmala, Ella, Liang, Kuo-Hsuan, D. Végh, Anna M., Scholman, Koen T., Groot Koerkamp, Marian J., Holstege, Frank C., Cuppen, Edwin, Schulte-Merker, Stefan, Bakker, Walbert J.
Published 2016

Expression Profiling after Prolonged Experimental Febrile Seizures in Mice Suggests Structural Remodeling in the Hippocampus

by Jongbloets, Bart C., van Gassen, Koen L. I., Kan, Anne A., Olde Engberink, Anneke H. O., de Wit, Marina, Wolterink-Donselaar, Inge G., Groot Koerkamp, Marian J. A., van Nieuwenhuizen, Onno, Holstege, Frank C. P., de Graan, Pierre N. E.
Published 2015

An endometrial gene expression signature accurately predicts recurrent implantation failure after IVF

by Koot, Yvonne E. M., van Hooff, Sander R., Boomsma, Carolien M., van Leenen, Dik, Groot Koerkamp, Marian J. A., Goddijn, Mariëtte, Eijkemans, Marinus J. C., Fauser, Bart C. J. M., Holstege, Frank C. P., Macklon, Nick S.
Published 2016

The Genomic Landscape of Compensatory Evolution

by Szamecz, Béla, Boross, Gábor, Kalapis, Dorottya, Kovács, Károly, Fekete, Gergely, Farkas, Zoltán, Lázár, Viktória, Hrtyan, Mónika, Kemmeren, Patrick, Groot Koerkamp, Marian J. A., Rutkai, Edit, Holstege, Frank C. P., Papp, Balázs, Pál, Csaba
Published 2014

Exploring Gene Expression Signatures for Predicting Disease Free Survival after Resection of Colorectal Cancer Liver Metastases

by Snoeren, Nikol, van Hooff, Sander R., Adam, Rene, van Hillegersberg, Richard, Voest, Emile E., Guettier, Catherine, van Diest, Paul J., Nijkamp, Maarten W., Brok, Mariel O., van Leenen, Dik, Groot Koerkamp, Marian J. A., Holstege, Frank C. P., Borel Rinkes, Inne H. M.
Published 2012

Gene expression profiling of early intervertebral disc degeneration reveals a down-regulation of canonical Wnt signaling and caveolin-1 expression: implications for development of...

by Smolders, Lucas A, Meij, Björn P, Onis, David, Riemers, Frank M, Bergknut, Niklas, Wubbolts, Richard, Grinwis, Guy CM, Houweling, Martin, Groot Koerkamp, Marian JA, van Leenen, Dik, Holstege, Frank CP, Hazewinkel, Herman AW, Creemers, Laura B, Penning, Louis C, Tryfonidou, Marianna A
Published 2013

Lmx1a Encodes a Rostral Set of Mesodiencephalic Dopaminergic Neurons Marked by the Wnt/B-Catenin Signaling Activator R-spondin 2

by Hoekstra, Elisa J., von Oerthel, Lars, van der Heide, Lars P., Kouwenhoven, Willemieke M., Veenvliet, Jesse V., Wever, Iris, Jin, Yong-Ri, Yoon, Jeong K., van der Linden, Annemarie J. A., Holstege, Frank C. P., Groot Koerkamp, Marian J., Smidt, Marten P.
Published 2013

Uterine Selection of Human Embryos at Implantation

by Brosens, Jan J., Salker, Madhuri S., Teklenburg, Gijs, Nautiyal, Jaya, Salter, Scarlett, Lucas, Emma S., Steel, Jennifer H., Christian, Mark, Chan, Yi-Wah, Boomsma, Carolien M., Moore, Jonathan D., Hartshorne, Geraldine M., Šućurović, Sandra, Mulac-Jericevic, Biserka, Heijnen, Cobi J., Quenby, Siobhan, Groot Koerkamp, Marian J., Holstege, Frank C. P., Shmygol, Anatoly, Macklon, Nick S.
Published 2014

A high-resolution gene expression atlas of epistasis between gene-specific transcription factors exposes potential mechanisms for genetic interactions

by Sameith, Katrin, Amini, Saman, Groot Koerkamp, Marian J. A., van Leenen, Dik, Brok, Mariel, Brabers, Nathalie, Lijnzaad, Philip, van Hooff, Sander R., Benschop, Joris J., Lenstra, Tineke L., Apweiler, Eva, van Wageningen, Sake, Snel, Berend, Holstege, Frank C. P., Kemmeren, Patrick
Published 2015