PSI/TM-Coffee: a web server for fast and accurate multiple sequence alignments of regular and transmembrane proteins using homology extension on reduced databases
The PSI/TM-Coffee web server performs multiple sequence alignment (MSA) of proteins by combining homology extension with a consistency based alignment approach. Homology extension is performed with Position Specific Iterative (PSI) BLAST searches against a choice of redundant and non-redundant datab...
Main Authors: | Floden, Evan W., Tommaso, Paolo D., Chatzou, Maria, Magis, Cedrik, Notredame, Cedric, Chang, Jia-Ming |
---|---|
Format: | Online |
Language: | English |
Published: |
Oxford University Press
2016
|
Online Access: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4987888/ |
Similar Items
-
Accurate multiple sequence alignment of transmembrane proteins with PSI-Coffee
by: Chang, Jia-Ming, et al.
Published: (2012) -
T-RMSD: a web server for automated fine-grained protein structural classification
by: Magis, Cedrik, et al.
Published: (2013) -
SARA-Coffee web server, a tool for the computation of RNA sequence and structure multiple alignments
by: Di Tommaso, Paolo, et al.
Published: (2014) -
T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension
by: Di Tommaso, Paolo, et al.
Published: (2011) -
The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods
by: Moretti, Sebastien, et al.
Published: (2007)