An ensemble approach to accurately detect somatic mutations using SomaticSeq
SomaticSeq is an accurate somatic mutation detection pipeline implementing a stochastic boosting algorithm to produce highly accurate somatic mutation calls for both single nucleotide variants and small insertions and deletions. The workflow currently incorporates five state-of-the-art somatic mutat...
Main Authors: | Fang, Li Tai, Afshar, Pegah Tootoonchi, Chhibber, Aparna, Mohiyuddin, Marghoob, Fan, Yu, Mu, John C., Gibeling, Greg, Barr, Sharon, Asadi, Narges Bani, Gerstein, Mark B., Koboldt, Daniel C., Wang, Wenyi, Wong, Wing H., Lam, Hugo YK |
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Format: | Online |
Language: | English |
Published: |
BioMed Central
2015
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Online Access: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4574535/ |
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