An Affinity Propagation-Based DNA Motif Discovery Algorithm

The planted (l, d) motif search (PMS) is one of the fundamental problems in bioinformatics, which plays an important role in locating transcription factor binding sites (TFBSs) in DNA sequences. Nowadays, identifying weak motifs and reducing the effect of local optimum are still important but challe...

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Bibliographic Details
Main Authors: Sun, Chunxiao, Huo, Hongwei, Yu, Qiang, Guo, Haitao, Sun, Zhigang
Format: Online
Language:English
Published: Hindawi Publishing Corporation 2015
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4547008/