ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes

Recombination is an important evolutionary force in bacteria, but it remains challenging to reconstruct the imports that occurred in the ancestry of a genomic sample. Here we present ClonalFrameML, which uses maximum likelihood inference to simultaneously detect recombination in bacterial genomes an...

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Bibliographic Details
Main Authors: Didelot, Xavier, Wilson, Daniel J.
Format: Online
Language:English
Published: Public Library of Science 2015
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4326465/