Using ancestry-informative markers to identify fine structure across 15 populations of European origin

Using ancestry-informative markers to identify fine structure across 15 populations of European origin

The Wellcome Trust Case Control Consortium 3 anorexia nervosa genome-wide association scan includes 2907 cases from 15 different populations of European origin genotyped on the Illumina 670K chip. We compared methods for identifying population stratification, and suggest list of markers that may hel...

Full description

Bibliographic Details
Main Authors:	Huckins, Laura M, Boraska, Vesna, Franklin, Christopher S, Floyd, James A B, Southam, Lorraine, Sullivan, Patrick F, Bulik, Cynthia M, Collier, David A, Tyler-Smith, Chris, Zeggini, Eleftheria, Tachmazidou, Ioanna
Format:	Online
Language:	English
Published:	Nature Publishing Group 2014
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4169539/

Similar Items

In search of low-frequency and rare variants affecting complex traits
by: Panoutsopoulou, Kalliope, et al.
Published: (2013)

Rare Variant Association Testing for Next-Generation Sequencing Data via Hierarchical Clustering
by: Tachmazidou, Ioanna, et al.
Published: (2013)

Replication of Established Common Genetic Variants for Adult BMI and Childhood Obesity in Greek Adolescents: The TEENAGE Study
by: Ntalla, Ioanna, et al.
Published: (2013)

Estimating Genome-Wide Significance for Whole-Genome Sequencing Studies
by: Xu, ChangJiang, et al.
Published: (2014)

An evaluation of different meta-analysis approaches in the presence of allelic heterogeneity
by: Asimit, Jennifer, et al.
Published: (2012)

Very low-depth sequencing in a founder population identifies a cardioprotective APOC3 signal missed by genome-wide imputation
by: Gilly, Arthur, et al.
Published: (2016)

The Geography of Recent Genetic Ancestry across Europe
by: Ralph, Peter, et al.
Published: (2013)

Trans-ethnic study design approaches for fine-mapping
by: Asimit, Jennifer L, et al.
Published: (2016)

Using genetically isolated populations to understand the genomic basis of disease
by: Zeggini, Eleftheria
Published: (2014)

AncestryPlus
Published: (2003)

Testing for rare variant associations in complex diseases
by: Asimit, Jennifer, et al.
Published: (2011)

Advances in osteoarthritis genetics
by: Panoutsopoulou, Kalliope, et al.
Published: (2013)

Functional genomics in osteoarthritis: Past, present, and future
by: Steinberg, Julia, et al.
Published: (2016)

The ubiquity and ancestry of insect doublesex
by: Price, Dana C., et al.
Published: (2015)

The Ancestry of the Long-Lived
Published: (1934)

Inference of Transposable Element Ancestry
by: Wacholder, Aaron C., et al.
Published: (2014)

Tracing German Ancestry
by: Raymond S., Wright
Published: (1985)

Correction: Identification, Replication, and Fine-Mapping of Loci Associated with Adult Height in Individuals of African Ancestry
by: N'Diaye, Amidou, et al.
Published: (2011)

Identification, Replication, and Fine-Mapping of Loci Associated with Adult Height in Individuals of African Ancestry
by: N'Diaye, Amidou, et al.
Published: (2011)

GAGA: A New Algorithm for Genomic Inference of Geographic Ancestry Reveals Fine Level Population Substructure in Europeans
by: Lao, Oscar, et al.
Published: (2014)

Detection of Ancestry Informative HLA Alleles Confirms the Admixed Origins of Japanese Population
by: Nakaoka, Hirofumi, et al.
Published: (2013)

The Unicellular Ancestry of Groucho-Mediated Repression and the Origins of Metazoan Transcription Factors
by: Copley, Richard R.
Published: (2016)

Detecting Structure of Haplotypes and Local Ancestry
by: Guan, Yongtao
Published: (2014)

Genomics Assisted Ancestry Deconvolution in Grape
by: Sawler, Jason, et al.
Published: (2013)

Uniparental ancestry markers in Chilean populations
by: Vieira-Machado, Camilla Dutra, et al.
Published: (2016)

Resolving the ancestry of Austronesian-speaking populations
by: Soares, Pedro A., et al.
Published: (2016)

Ancestry, admixture and fitness in Colombian genomes
by: Rishishwar, Lavanya, et al.
Published: (2015)

Detecting individual ancestry in the human genome
by: Wollstein, Andreas, et al.
Published: (2015)

Ancestry-informative markers on chromosomes 2, 8 and 15 are associated with insulin-related traits in a racially diverse sample of children
by: Klimentidis, Yann C, et al.
Published: (2011)

The effect of next-generation sequencing technology on complex trait research
by: Day-Williams, Aaron G, et al.
Published: (2011)

Insights into metabolic disease from studying genetics in isolated populations: stories from Greece to Greenland
by: Zeggini, Eleftheria, et al.
Published: (2016)

Using population isolates in genetic association studies
by: Hatzikotoulas, Konstantinos, et al.
Published: (2014)

Methylation quantitative trait loci (meQTLs) are consistently detected across ancestry, developmental stage, and tissue type
by: Smith, Alicia K, et al.
Published: (2014)

AD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data
by: Nathan K. Schaefer, et al.
Published: (2017-04-01)

Population structure analysis on 2504 individuals across 26 ancestries using bioinformatics approaches
by: Wang, Jing, et al.
Published: (2015)

Unequal representation of genetic variation across ancestry groups creates healthcare inequality in the application of precision medicine
by: Petrovski, Slavé, et al.
Published: (2016)

A rare functional cardioprotective APOC3 variant has risen in frequency in distinct population isolates
by: Tachmazidou, Ioanna, et al.
Published: (2013)

Genetic Association Mapping via Evolution-Based Clustering of Haplotypes
by: Tachmazidou, Ioanna, et al.
Published: (2007)

FINE STRUCTURAL LOCALIZATION OF ACETYLCHOLINESTERASE IN ELECTROPLAQUE OF THE ELECTRIC EEL
by: Bloom, Floyd E., et al.
Published: (1966)

Straightforward Inference of Ancestry and Admixture Proportions through Ancestry-Informative Insertion Deletion Multiplexing
by: Pereira, Rui, et al.
Published: (2012)