The Focal Adhesion Analysis Server: a web tool for analyzing focal adhesion dynamics
The Focal Adhesion Analysis Server (FAAS) is a web-based implementation of a set of computer vision algorithms designed to quantify the behavior of focal adhesions in cells imaged in 2D cultures. The input consists of one or more images of a labeled focal adhesion protein. The outputs of the system...
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| Format: | Online |
| Language: | English |
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F1000Research
2013
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| Online Access: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3752736/ |
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pubmed-37527362013-12-05 The Focal Adhesion Analysis Server: a web tool for analyzing focal adhesion dynamics Berginski, Matthew E Gomez, Shawn M Web Tools The Focal Adhesion Analysis Server (FAAS) is a web-based implementation of a set of computer vision algorithms designed to quantify the behavior of focal adhesions in cells imaged in 2D cultures. The input consists of one or more images of a labeled focal adhesion protein. The outputs of the system include a range of static and dynamic measurements for the adhesions present in each image as well as how these properties change over time. The user is able to adjust several parameters important for proper focal adhesion identification. This system provides a straightforward tool for the global, unbiased assessment of focal adhesion behavior common in optical microscopy studies. The webserver is available at: http://faas.bme.unc.edu/. F1000Research 2013-03-04 /pmc/articles/PMC3752736/ /pubmed/24358855 http://dx.doi.org/10.12688/f1000research.2-68.v1 Text en Copyright: © 2013 Berginski ME et al. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
| repository_type |
Open Access Journal |
| institution_category |
Foreign Institution |
| institution |
US National Center for Biotechnology Information |
| building |
NCBI PubMed |
| collection |
Online Access |
| language |
English |
| format |
Online |
| author |
Berginski, Matthew E Gomez, Shawn M |
| spellingShingle |
Berginski, Matthew E Gomez, Shawn M The Focal Adhesion Analysis Server: a web tool for analyzing focal adhesion dynamics |
| author_facet |
Berginski, Matthew E Gomez, Shawn M |
| author_sort |
Berginski, Matthew E |
| title |
The Focal Adhesion Analysis Server: a web tool for analyzing focal adhesion dynamics |
| title_short |
The Focal Adhesion Analysis Server: a web tool for analyzing focal adhesion dynamics |
| title_full |
The Focal Adhesion Analysis Server: a web tool for analyzing focal adhesion dynamics |
| title_fullStr |
The Focal Adhesion Analysis Server: a web tool for analyzing focal adhesion dynamics |
| title_full_unstemmed |
The Focal Adhesion Analysis Server: a web tool for analyzing focal adhesion dynamics |
| title_sort |
focal adhesion analysis server: a web tool for analyzing focal adhesion dynamics |
| description |
The Focal Adhesion Analysis Server (FAAS) is a web-based implementation of a set of computer vision algorithms designed to quantify the behavior of focal adhesions in cells imaged in 2D cultures. The input consists of one or more images of a labeled focal adhesion protein. The outputs of the system include a range of static and dynamic measurements for the adhesions present in each image as well as how these properties change over time. The user is able to adjust several parameters important for proper focal adhesion identification. This system provides a straightforward tool for the global, unbiased assessment of focal adhesion behavior common in optical microscopy studies. The webserver is available at:
http://faas.bme.unc.edu/. |
| publisher |
F1000Research |
| publishDate |
2013 |
| url |
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3752736/ |
| _version_ |
1612005903735717888 |