POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data

The purpose of the online resource presented here, POPcorn (Project Portal for corn), is to enhance accessibility of maize genetic and genomic resources for plant biologists. Currently, many online locations are difficult to find, some are best searched independently, and individual project websites...

Full description

Bibliographic Details
Main Authors:	Cannon, Ethalinda K. S., Birkett, Scott M., Braun, Bremen L., Kodavali, Sateesh, Jennewein, Douglas M., Yilmaz, Alper, Antonescu, Valentin, Antonescu, Corina, Harper, Lisa C., Gardiner, Jack M., Schaeffer, Mary L., Campbell, Darwin A., Andorf, Carson M., Andorf, Destri, Lisch, Damon, Koch, Karen E., McCarty, Donald R., Quackenbush, John, Grotewold, Erich, Lushbough, Carol M., Sen, Taner Z., Lawrence, Carolyn J.
Format:	Online
Language:	English
Published:	Hindawi Publishing Corporation 2011
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3255282/

id	pubmed-3255282
recordtype	oai_dc
spelling	pubmed-32552822012-01-17 POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data Cannon, Ethalinda K. S. Birkett, Scott M. Braun, Bremen L. Kodavali, Sateesh Jennewein, Douglas M. Yilmaz, Alper Antonescu, Valentin Antonescu, Corina Harper, Lisa C. Gardiner, Jack M. Schaeffer, Mary L. Campbell, Darwin A. Andorf, Carson M. Andorf, Destri Lisch, Damon Koch, Karen E. McCarty, Donald R. Quackenbush, John Grotewold, Erich Lushbough, Carol M. Sen, Taner Z. Lawrence, Carolyn J. Research Article The purpose of the online resource presented here, POPcorn (Project Portal for corn), is to enhance accessibility of maize genetic and genomic resources for plant biologists. Currently, many online locations are difficult to find, some are best searched independently, and individual project websites often degrade over time—sometimes disappearing entirely. The POPcorn site makes available (1) a centralized, web-accessible resource to search and browse descriptions of ongoing maize genomics projects, (2) a single, stand-alone tool that uses web Services and minimal data warehousing to search for sequence matches in online resources of diverse offsite projects, and (3) a set of tools that enables researchers to migrate their data to the long-term model organism database for maize genetic and genomic information: MaizeGDB. Examples demonstrating POPcorn's utility are provided herein. Hindawi Publishing Corporation 2011 2011-12-27 /pmc/articles/PMC3255282/ /pubmed/22253616 http://dx.doi.org/10.1155/2011/923035 Text en Copyright © 2011 Ethalinda K. S. Cannon et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
repository_type	Open Access Journal
institution_category	Foreign Institution
institution	US National Center for Biotechnology Information
building	NCBI PubMed
collection	Online Access
language	English
format	Online
author	Cannon, Ethalinda K. S. Birkett, Scott M. Braun, Bremen L. Kodavali, Sateesh Jennewein, Douglas M. Yilmaz, Alper Antonescu, Valentin Antonescu, Corina Harper, Lisa C. Gardiner, Jack M. Schaeffer, Mary L. Campbell, Darwin A. Andorf, Carson M. Andorf, Destri Lisch, Damon Koch, Karen E. McCarty, Donald R. Quackenbush, John Grotewold, Erich Lushbough, Carol M. Sen, Taner Z. Lawrence, Carolyn J.
spellingShingle	Cannon, Ethalinda K. S. Birkett, Scott M. Braun, Bremen L. Kodavali, Sateesh Jennewein, Douglas M. Yilmaz, Alper Antonescu, Valentin Antonescu, Corina Harper, Lisa C. Gardiner, Jack M. Schaeffer, Mary L. Campbell, Darwin A. Andorf, Carson M. Andorf, Destri Lisch, Damon Koch, Karen E. McCarty, Donald R. Quackenbush, John Grotewold, Erich Lushbough, Carol M. Sen, Taner Z. Lawrence, Carolyn J. POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data
author_facet	Cannon, Ethalinda K. S. Birkett, Scott M. Braun, Bremen L. Kodavali, Sateesh Jennewein, Douglas M. Yilmaz, Alper Antonescu, Valentin Antonescu, Corina Harper, Lisa C. Gardiner, Jack M. Schaeffer, Mary L. Campbell, Darwin A. Andorf, Carson M. Andorf, Destri Lisch, Damon Koch, Karen E. McCarty, Donald R. Quackenbush, John Grotewold, Erich Lushbough, Carol M. Sen, Taner Z. Lawrence, Carolyn J.
author_sort	Cannon, Ethalinda K. S.
title	POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data
title_short	POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data
title_full	POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data
title_fullStr	POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data
title_full_unstemmed	POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data
title_sort	popcorn: an online resource providing access to distributed and diverse maize project data
description	The purpose of the online resource presented here, POPcorn (Project Portal for corn), is to enhance accessibility of maize genetic and genomic resources for plant biologists. Currently, many online locations are difficult to find, some are best searched independently, and individual project websites often degrade over time—sometimes disappearing entirely. The POPcorn site makes available (1) a centralized, web-accessible resource to search and browse descriptions of ongoing maize genomics projects, (2) a single, stand-alone tool that uses web Services and minimal data warehousing to search for sequence matches in online resources of diverse offsite projects, and (3) a set of tools that enables researchers to migrate their data to the long-term model organism database for maize genetic and genomic information: MaizeGDB. Examples demonstrating POPcorn's utility are provided herein.
publisher	Hindawi Publishing Corporation
publishDate	2011
url	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3255282/
_version_	1611499228290351104

POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data

Similar Items