TMB-Hunt: An amino acid composition based method to screen proteomes for beta-barrel transmembrane proteins

by Garrow, Andrew G, Agnew, Alison, Westhead, David R
Published 2005

Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation

by Jen, Chih-Hung, Michalopoulos, Ioannis, Westhead, David R, Meyer, Peter
Published 2005

TmaDB: a repository for tissue microarray data

by Sharma-Oates, Archana, Quirke, Philip, Westhead, David R
Published 2005

TMB-Hunt: a web server to screen sequence sets for transmembrane β-barrel proteins

by Garrow, Andrew G., Agnew, Alison, Westhead, David R.
Published 2005

Cancer somatic mutations cluster in a subset of regulatory sites predicted from the ENCODE data

by Shar, Nisar A., Vijayabaskar, M. S., Westhead, David R.
Published 2016

Gene expression meta-analysis reveals immune response convergence on the IFNγ-STAT1-IRF1 axis and adaptive immune resistance mechanisms in lymphoma

by Care, Matthew A., Westhead, David R., Tooze, Reuben M.
Published 2015

Using common variants to indicate cancer genes

by Stead, Lucy F, Thygesen, Helene, Westhead, David R, Rabbitts, Pamela
Published 2015

metaSHARK: software for automated metabolic network prediction from DNA sequence and its application to the genomes of Plasmodium falciparum and Eimeria tenella

by Pinney, John W., Shirley, Martin W., McConkey, Glenn A., Westhead, David R.
Published 2005

metaSHARK: a WWW platform for interactive exploration of metabolic networks

by Hyland, Christopher, Pinney, John W., McConkey, Glenn A., Westhead, David R.
Published 2006

Predicting the effect of missense mutations on protein function: analysis with Bayesian networks

by Needham, Chris J, Bradford, James R, Bulpitt, Andrew J, Care, Matthew A, Westhead, David R
Published 2006

Bayesian refinement of protein functional site matching

by Mardia, Kanti V, Nyirongo, Vysaul B, Green, Peter J, Gold, Nicola D, Westhead, David R
Published 2007

A Primer on Learning in Bayesian Networks for Computational Biology

by Needham, Chris J, Bradford, James R, Bulpitt, Andrew J, Westhead, David R
Published 2007

A Microarray Platform-Independent Classification Tool for Cell of Origin Class Allows Comparative Analysis of Gene Expression in Diffuse Large B-cell Lymphoma

by Care, Matthew A., Barrans, Sharon, Worrillow, Lisa, Jack, Andrew, Westhead, David R., Tooze, Reuben M.
Published 2013

Arabidopsis Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis

by Manfield, Iain W., Jen, Chih-Hung, Pinney, John W., Michalopoulos, Ioannis, Bradford, James R., Gilmartin, Philip M., Westhead, David R.
Published 2006

Transferring genomics to the clinic: distinguishing Burkitt and diffuse large B cell lymphomas

by Sha, Chulin, Barrans, Sharon, Care, Matthew A., Cunningham, David, Tooze, Reuben M., Jack, Andrew, Westhead, David R.
Published 2015

Prognostic microRNAs in high-grade glioma reveal a link to oligodendrocyte precursor differentiation

by Hayes, Josie, Thygesen, Helene, Droop, Alastair, Hughes, Thomas A., Westhead, David, Lawler, Sean E., Wurdak, Heiko, Short, Susan C.
Published 2014

Identification of the REST regulon reveals extensive transposable element-mediated binding site duplication

by Johnson, Rory, Gamblin, Richard J., Ooi, Lezanne, Bruce, Alexander W., Donaldson, Ian J., Westhead, David R., Wood, Ian C., Jackson, Richard M., Buckley, Noel J.
Published 2006

Integrated analyses of chromatin accessibility and gene expression data for elucidating the transcriptional regulatory mechanisms during early hematopoietic development in mouse

by Viiavabaskar, Mahalingam S, Obier, Nadine, Pearson, Stella, Hoogenkamp, Maarten, Lichtinger, Monika, Lacaud, Georges, Kouskoff, Valerie, Gottgens, Bertie, Bonifer, Constanze, Westhead, David R
Published 2013

System-wide studies of the transcriptional programming of chromatin during early hematopoietic development

by Obier, Nadine, Vijayabaskar, Mahalingam S, Pearson, Stella, Hoogenkamp, Maarten, Lichtinger, Monika, Cauchy, Pierre, Westhead, David, Kouskoff, Valerie, Lacaud, Georges, Gottgens, Bertie, Bonifer, Constanze
Published 2013

A crucial role for the ubiquitously expressed transcription factor Sp1 at early stages of hematopoietic specification

by Gilmour, Jane, Assi, Salam A., Jaegle, Ulrike, Kulu, Divine, van de Werken, Harmen, Clarke, Deborah, Westhead, David R., Philipsen, Sjaak, Bonifer, Constanze
Published 2014