Comparing machine learning and logistic regression methods for predicting hypertension using a combination of gene expression and next-generation sequencing data

by Held, Elizabeth, Cape, Joshua, Tintle, Nathan
Published 2016

Evaluating the concordance between sequencing, imputation and microarray genotype calls in the GAW18 data

by Rogers, Ally, Beck, Andrew, Tintle, Nathan L
Published 2014

Assessing the Impact of Differential Genotyping Errors on Rare Variant Tests of Association

by Mayer-Jochimsen, Morgan, Fast, Shannon, Tintle, Nathan L.
Published 2013

Assessing Methods for Assigning SNPs to Genes in Gene-Based Tests of Association Using Common Variants

by Petersen, Ashley, Alvarez, Carolina, DeClaire, Scott, Tintle, Nathan L.
Published 2013

Evaluating the impact of genotype errors on rare variant tests of association

by Cook, Kaitlyn, Benitez, Alejandra, Fu, Casey, Tintle, Nathan
Published 2014

A multistep approach to single nucleotide polymorphism–set analysis: an evaluation of power and type I error of gene-based tests of association after pathway-based association test...

by Valcarcel, Alessandra, Grinde, Kelsey, Cook, Kaitlyn, Green, Alden, Tintle, Nathan
Published 2016

A general method for combining different family-based rare-variant tests of association to improve power and robustness of a wide range of genetic architectures

by Green, Alden, Cook, Kaitlyn, Grinde, Kelsey, Valcarcel, Alessandra, Tintle, Nathan
Published 2016

Characteristics of replicated single-nucleotide polymorphism genotypes from COGA: Affymetrix and Center for Inherited Disease Research

by Tintle, Nathan L, Ahn, Kwangmi, Mendell, Nancy Role, Gordon, Derek, Finch, Stephen J
Published 2005

The Cost-Effectiveness of Reclassification Sampling for Prevalence Estimation

by Bekmetjev, Airat, VanBruggen, Dirk, McLellan, Brian, DeWinkle, Benjamin, Lunderberg, Eric, Tintle, Nathan
Published 2012

Evaluating methods for the analysis of rare variants in sequence data

by Luedtke, Alexander, Powers, Scott, Petersen, Ashley, Sitarik, Alexandra, Bekmetjev, Airat, Tintle, Nathan L
Published 2011

Evaluating methods for combining rare variant data in pathway-based tests of genetic association

by Petersen, Ashley, Sitarik, Alexandra, Luedtke, Alexander, Powers, Scott, Bekmetjev, Airat, Tintle, Nathan L
Published 2011

Evaluating the consistency of gene sets used in the analysis of bacterial gene expression data

by Tintle, Nathan L, Sitarik, Alexandra, Boerema, Benjamin, Young, Kylie, Best, Aaron A, DeJongh, Matthew
Published 2012

Cautions about the reliability of pairwise gene correlations based on expression data

by Powers, Scott, DeJongh, Matt, Best, Aaron A., Tintle, Nathan L.
Published 2015

Application of family-based tests of association for rare variants to pathways

by Greco, Brian, Luedtke, Alexander, Hainline, Allison, Alvarez, Carolina, Beck, Andrew, Tintle, Nathan L
Published 2014

Evaluation of the power and type I error of recently proposed family-based tests of association for rare variants

by Hainline, Allison, Alvarez, Carolina, Luedtke, Alexander, Greco, Brian, Beck, Andrew, Tintle, Nathan L
Published 2014

Machine learning and data mining in complex genomic data—a review on the lessons learned in Genetic Analysis Workshop 19

by König, Inke R., Auerbach, Jonathan, Gola, Damian, Held, Elizabeth, Holzinger, Emily R., Legault, Marc-André, Sun, Rui, Tintle, Nathan, Yang, Hsin-Chou
Published 2016

A Bayesian Framework for the Classification of Microbial Gene Activity States

by Disselkoen, Craig, Greco, Brian, Cook, Kaitlyn, Koch, Kristin, Lerebours, Reginald, Viss, Chase, Cape, Joshua, Held, Elizabeth, Ashenafi, Yonatan, Fischer, Karen, Acosta, Allyson, Cunningham, Mark, Best, Aaron A., DeJongh, Matthew, Tintle, Nathan
Published 2016

Computing and Applying Atomic Regulons to Understand Gene Expression and Regulation

by Faria, José P., Davis, James J., Edirisinghe, Janaka N., Taylor, Ronald C., Weisenhorn, Pamela, Olson, Robert D., Stevens, Rick L., Rocha, Miguel, Rocha, Isabel, Best, Aaron A., DeJongh, Matthew, Tintle, Nathan L., Parrello, Bruce, Overbeek, Ross, Henry, Christopher S.
Published 2016

Identifying rare variants from exome scans: the GAW17 experience

by Ghosh, Saurabh, Bickeböller, Heike, Bailey, Julia, Bailey-Wilson, Joan E, Cantor, Rita, Culverhouse, Robert, Daw, Warwick, DeStefano, Anita L, Engelman, Corinne D, Hinrichs, Anthony, Houwing-Duistermaat, Jeanine, König, Inke R, Kent, Jack, Laird, Nan, Pankratz, Nathan, Paterson, Andrew, Pugh, Elizabeth, Suarez, Brian, Sun, Yan, Thomas, Alun, Tintle, Nathan, Zhu, Xiaofeng, Ziegler, Andreas, MacCluer, Jean W, Almasy, Laura
Published 2011

Genetic Analysis Workshop 18: Methods and strategies for analyzing human sequence and phenotype data in members of extended pedigrees

by Bickeböller, Heike, Bailey, Julia N, Beyene, Joseph, Cantor, Rita M, Cordell, Heather J, Culverhouse, Robert C, Engelman, Corinne D, Fardo, David W, Ghosh, Saurabh, König, Inke R, Lorenzo Bermejo, Justo, Melton, Phillip E, Santorico, Stephanie A, Satten, Glen A, Sun, Lei, Tintle, Nathan L, Ziegler, Andreas, MacCluer, Jean W, Almasy, Laura
Published 2014