History and impact of RDP: A legacy from Carl Woese to microbiology

by Cole, James R, Tiedje, James M
Published 2014

Recently Deglaciated High-Altitude Soils of the Himalaya: Diverse Environments, Heterogenous Bacterial Communities and Long-Range Dust Inputs from the Upper Troposphere

by Stres, Blaz, Sul, Woo Jun, Murovec, Bostjan, Tiedje, James M.
Published 2013

Correction: Recently Deglaciated High-Altitude Soils of the Himalaya: Diverse Environments, Heterogenous Bacterial Communities and Long-Range Dust Inputs from the Upper Troposphere

by Stres, Blaz, Sul, Woo Jun, Murovec, Bostjan, Tiedje, James M.
Published 2014

Revealing the Bacterial Butyrate Synthesis Pathways by Analyzing (Meta)genomic Data

by Vital, Marius, Howe, Adina Chuang, Tiedje, James M.
Published 2014

On-chip non-equilibrium dissociation curves and dissociation rate constants as methods to assess specificity of oligonucleotide probes

by Wick, Lukas M., Rouillard, Jean Marie, Whittam, Thomas S., Gulari, Erdogan, Tiedje, James M., Hashsham, Syed A.
Published 2006

Genomic Diversity of Escherichia Isolates from Diverse Habitats

by Oh, Seungdae, Buddenborg, Sarah, Yoder-Himes, Deborah R., Tiedje, James M., Konstantinidis, Konstantinos T.
Published 2012

Shewanella baltica Ecotypes Have Wide Transcriptional Variation under the Same Growth Conditions

by Hambright, W. S., Deng, Jie, Tiedje, James M., Brettar, Ingrid, Rodrigues, Jorge L. M.
Published 2016

Using the class 1 integron-integrase gene as a proxy for anthropogenic pollution

by Gillings, Michael R, Gaze, William H, Pruden, Amy, Smalla, Kornelia, Tiedje, James M, Zhu, Yong-Guan
Published 2015

Microbial Diversity of a Mediterranean Soil and Its Changes after Biotransformed Dry Olive Residue Amendment

by Siles, José A., Rachid, Caio T. C. C., Sampedro, Inmaculada, García-Romera, Inmaculada, Tiedje, James M.
Published 2014

Size Matters: Assessing Optimum Soil Sample Size for Fungal and Bacterial Community Structure Analyses Using High Throughput Sequencing of rRNA Gene Amplicons

by Penton, C. Ryan, Gupta, Vadakattu V. S. R., Yu, Julian, Tiedje, James M.
Published 2016

Comparing the Bacterial Diversity of Acute and Chronic Dental Root Canal Infections

by Santos, Adriana L., Siqueira, José F., Rôças, Isabela N., Jesus, Ederson C., Rosado, Alexandre S., Tiedje, James M.
Published 2011

Genome sequence of Desulfitobacterium hafniense DCB-2, a Gram-positive anaerobe capable of dehalogenation and metal reduction

by Kim, Sang-Hoon, Harzman, Christina, Davis, John K, Hutcheson, Rachel, Broderick, Joan B, Marsh, Terence L, Tiedje, James M
Published 2012

Ecological Patterns of nifH Genes in Four Terrestrial Climatic Zones Explored with Targeted Metagenomics Using FrameBot, a New Informatics Tool

by Wang, Qiong, Quensen, John F., Fish, Jordan A., Kwon Lee, Tae, Sun, Yanni, Tiedje, James M., Cole, James R.
Published 2013

FunGene: the functional gene pipeline and repository

by Fish, Jordan A., Chai, Benli, Wang, Qiong, Sun, Yanni, Brown, C. Titus, Tiedje, James M., Cole, James R.
Published 2013

Functional genes to assess nitrogen cycling and aromatic hydrocarbon degradation: primers and processing matter

by Penton, C. Ryan, Johnson, Timothy A., Quensen, John F., Iwai, Shoko, Cole, James R., Tiedje, James M.
Published 2013

Xander: employing a novel method for efficient gene-targeted metagenomic assembly

by Wang, Qiong, Fish, Jordan A., Gilman, Mariah, Sun, Yanni, Brown, C. Titus, Tiedje, James M., Cole, James R.
Published 2015

Intercropped Silviculture Systems, a Key to Achieving Soil Fungal Community Management in Eucalyptus Plantations

by Rachid, Caio T. C. C., Balieiro, Fabiano C., Fonseca, Eduardo S., Peixoto, Raquel Silva, Chaer, Guilherme M., Tiedje, James M., Rosado, Alexandre S.
Published 2015

Fnr (EtrA) acts as a fine-tuning regulator of anaerobic metabolism in Shewanella oneidensis MR-1

by Cruz-García, Claribel, Murray, Alison E, Rodrigues, Jorge LM, Gralnick, Jeffrey A, McCue, Lee Ann, Romine, Margaret F, Löffler, Frank E, Tiedje, James M
Published 2011

Effect of Sugarcane Burning or Green Harvest Methods on the Brazilian Cerrado Soil Bacterial Community Structure

by Rachid, Caio T. C. C., Santos, Adriana L., Piccolo, Marisa C., Balieiro, Fabiano C., Coutinho, Heitor L. C., Peixoto, Raquel S., Tiedje, James M., Rosado, Alexandre S.
Published 2013

Ribosomal Database Project: data and tools for high throughput rRNA analysis

by Cole, James R., Wang, Qiong, Fish, Jordan A., Chai, Benli, McGarrell, Donna M., Sun, Yanni, Brown, C. Titus, Porras-Alfaro, Andrea, Kuske, Cheryl R., Tiedje, James M.
Published 2014