Functional genes to assess nitrogen cycling and aromatic hydrocarbon degradation: primers and processing matter

by Penton, C. Ryan, Johnson, Timothy A., Quensen, John F., Iwai, Shoko, Cole, James R., Tiedje, James M.
Published 2013

Piphillin: Improved Prediction of Metagenomic Content by Direct Inference from Human Microbiomes

by Iwai, Shoko, Weinmaier, Thomas, Schmidt, Brian L., Albertson, Donna G., Poloso, Neil J., Dabbagh, Karim, DeSantis, Todd Z.
Published 2016

The Lung Microbiome of Ugandan HIV-Infected Pneumonia Patients Is Compositionally and Functionally Distinct from That of San Franciscan Patients

by Iwai, Shoko, Huang, Delphine, Fong, Serena, Jarlsberg, Leah G., Worodria, William, Yoo, Samuel, Cattamanchi, Adithya, Davis, J. Lucian, Kaswabuli, Sylvia, Segal, Mark, Huang, Laurence, Lynch, Susan V.
Published 2014

Sphingomonas wittichii Strain RW1 Genome-Wide Gene Expression Shifts in Response to Dioxins and Clay

by Chai, Benli, Tsoi, Tamara V., Iwai, Shoko, Liu, Cun, Fish, Jordan A., Gu, Cheng, Johnson, Timothy A., Zylstra, Gerben, Teppen, Brian J., Li, Hui, Hashsham, Syed A., Boyd, Stephen A., Cole, James R., Tiedje, James M.
Published 2016