Evaluating statistical analysis models for RNA sequencing experiments

by Reeb, Pablo D., Steibel, Juan P.
Published 2013

Increases in the mean and variability of thermal regimes result in differential phenotypic responses among genotypes during early ontogenetic stages of lake sturgeon (Acipenser ful...

by Dammerman, Kari J., Steibel, Juan P., Scribner, Kim T.
Published 2016

Regulatory T Cell Activity and Signs of T Cell Unresponsiveness in Bovine Paratuberculosis

by Roussey, Jonathan A., Steibel, Juan P., Coussens, Paul M.
Published 2014

Assessing Dissimilarity Measures for Sample-Based Hierarchical Clustering of RNA Sequencing Data Using Plasmode Datasets

by Reeb, Pablo D., Bramardi, Sergio J., Steibel, Juan P.
Published 2015

A hidden Markov approach for ascertaining cSNP genotypes from RNA sequence data in the presence of allelic imbalance by exploiting linkage disequilibrium

by Steibel, Juan P, Wang, Heng, Zhong, Ping-Shou
Published 2015

Estimation of linkage disequilibrium in four US pig breeds

by Badke, Yvonne M, Bates, Ronald O, Ernst, Catherine W, Schwab, Clint, Steibel, Juan P
Published 2012

Differential Gene Expression Segregates Cattle Confirmed Positive for Bovine Tuberculosis from Antemortem Tuberculosis Test-False Positive Cattle Originating from Herds Free of Bov...

by Lim, Ailam, Steibel, Juan P., Coussens, Paul M., Grooms, Daniel L., Bolin, Steven R.
Published 2012

Accuracy of Estimation of Genomic Breeding Values in Pigs Using Low-Density Genotypes and Imputation

by Badke, Yvonne M., Bates, Ronald O., Ernst, Catherine W., Fix, Justin, Steibel, Juan P.
Published 2014

Linkage disequilibrium, persistence of phase and effective population size estimates in Hereford and Braford cattle

by Biegelmeyer, Patrícia, Gulias-Gomes, Claudia C., Caetano, Alexandre R., Steibel, Juan P., Cardoso, Fernando F.
Published 2016

Identification of Carcass and Meat Quality QTL in an F2 Duroc × Pietrain Pig Resource Population Using Different Least-Squares Analysis Models

by Choi, Igseo, Steibel, Juan P., Bates, Ronald O., Raney, Nancy E., Rumph, Janice M., Ernst, Catherine W.
Published 2011

Genotype imputation accuracy in a F2 pig population using high density and low density SNP panels

by Gualdrón Duarte, Jose L, Bates, Ronald O, Ernst, Catherine W, Raney, Nancy E, Cantet, Rodolfo JC, Steibel, Juan P
Published 2013

Methods of tagSNP selection and other variables affecting imputation accuracy in swine

by Badke, Yvonne M, Bates, Ronald O, Ernst, Catherine W, Schwab, Clint, Fix, Justin, Van Tassell, Curtis P, Steibel, Juan P
Published 2013

Exploring causal networks underlying fat deposition and muscularity in pigs through the integration of phenotypic, genotypic and transcriptomic data

by Peñagaricano, Francisco, Valente, Bruno D., Steibel, Juan P., Bates, Ronald O., Ernst, Catherine W., Khatib, Hasan, Rosa, Guilherme JM
Published 2015

Genomic Prediction Accounting for Residual Heteroskedasticity

by Ou, Zhining, Tempelman, Robert J., Steibel, Juan P., Ernst, Catherine W., Bates, Ronald O., Bello, Nora M.
Published 2015

Rapid screening for phenotype-genotype associations by linear transformations of genomic evaluations

by Gualdrón Duarte, Jose L, Cantet, Rodolfo JC, Bates, Ronald O, Ernst, Catherine W, Raney, Nancy E, Steibel, Juan P
Published 2014

Characterizing differential individual response to porcine reproductive and respiratory syndrome virus infection through statistical and functional analysis of gene expression

by Arceo, Maria E., Ernst, Catherine W., Lunney, Joan K., Choi, Igseo, Raney, Nancy E., Huang, Tinghua, Tuggle, Christopher K., Rowland, R. R. R., Steibel, Juan P.
Published 2013

Whole blood microarray analysis of pigs showing extreme phenotypes after a porcine reproductive and respiratory syndrome virus infection

by Schroyen, Martine, Steibel, Juan P., Koltes, James E., Choi, Igseo, Raney, Nancy E., Eisley, Christopher, Fritz-Waters, Eric, Reecy, James M., Dekkers, Jack C. M., Rowland, Robert R. R., Lunney, Joan K., Ernst, Catherine W., Tuggle, Christopher K.
Published 2015