Cas9 Functionally Opens Chromatin

by Barkal, Amira A., Srinivasan, Sharanya, Hashimoto, Tatsunori, Gifford, David K., Sherwood, Richard I.
Published 2016

Cloning-free CRISPR

by Arbab, Mandana, Srinivasan, Sharanya, Hashimoto, Tatsunori, Geijsen, Niels, Sherwood, Richard I.
Published 2015

Discovery of non-directional and directional pioneer transcription factors by modeling DNase profile magnitude and shape

by Sherwood, Richard I, Hashimoto, Tatsunori, O'Donnell, Charles W, Lewis, Sophia, Barkal, Amira A, van Hoff, John Peter, Karun, Vivek, Jaakkola, Tommi, Gifford, David K
Published 2014

An Integrated Model of Multiple-Condition ChIP-Seq Data Reveals Predeterminants of Cdx2 Binding

by Mahony, Shaun, Edwards, Matthew D., Mazzoni, Esteban O., Sherwood, Richard I., Kakumanu, Akshay, Morrison, Carolyn A., Wichterle, Hynek, Gifford, David K.
Published 2014

A multi-parametric flow cytometric assay to analyze DNA–protein interactions

by Arbab, Mandana, Mahony, Shaun, Cho, Hyunjii, Chick, Joel M., Rolfe, P. Alexander, van Hoff, John Peter, Morris, Viveca W.S., Gygi, Steven P., Maas, Richard L., Gifford, David K., Sherwood, Richard I.
Published 2013