Adjusting Phenotypes by Noise Control

by Kim, Kyung H., Sauro, Herbert M.
Published 2012

In search of noise-induced bimodality

by Kim, Kyung Hyuk, Sauro, Herbert M
Published 2012

Rationally designed bidirectional promoter improves the evolutionary stability of synthetic genetic circuits

by Yang, Song, Sleight, Sean C., Sauro, Herbert M.
Published 2013

Transcriptional Dynamics of the Embryonic Stem Cell Switch

by Chickarmane, Vijay, Troein, Carl, Nuber, Ulrike A, Sauro, Herbert M, Peterson, Carsten
Published 2006

BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems

by Le Novère, Nicolas, Bornstein, Benjamin, Broicher, Alexander, Courtot, Mélanie, Donizelli, Marco, Dharuri, Harish, Li, Lu, Sauro, Herbert, Schilstra, Maria, Shapiro, Bruce, Snoep, Jacky L., Hucka, Michael
Published 2006

A Reappraisal of How to Build Modular, Reusable Models of Biological Systems

by Neal, Maxwell L., Cooling, Michael T., Smith, Lucian P., Thompson, Christopher T., Sauro, Herbert M., Carlson, Brian E., Cook, Daniel L., Gennari, John H.
Published 2014

Minimum Information About a Simulation Experiment (MIASE)

by Waltemath, Dagmar, Adams, Richard, Beard, Daniel A., Bergmann, Frank T., Bhalla, Upinder S., Britten, Randall, Chelliah, Vijayalakshmi, Cooling, Michael T., Cooper, Jonathan, Crampin, Edmund J., Garny, Alan, Hoops, Stefan, Hucka, Michael, Hunter, Peter, Klipp, Edda, Laibe, Camille, Miller, Andrew K., Moraru, Ion, Nickerson, David, Nielsen, Poul, Nikolski, Macha, Sahle, Sven, Sauro, Herbert M., Schmidt, Henning, Snoep, Jacky L., Tolle, Dominic, Wolkenhauer, Olaf, Le Novère, Nicolas
Published 2011

Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach

by Meyer, Pablo, Cokelaer, Thomas, Chandran, Deepak, Kim, Kyung Hyuk, Loh, Po-Ru, Tucker, George, Lipson, Mark, Berger, Bonnie, Kreutz, Clemens, Raue, Andreas, Steiert, Bernhard, Timmer, Jens, Bilal, Erhan, DREAM 6&7 Parameter Estimation consortium, Sauro, Herbert M, Stolovitzky, Gustavo, Saez-Rodriguez, Julio
Published 2014

Synthetic Biology Open Language Visual (SBOL Visual) Version 2.0

by Cox Robert Sidney, Madsen Curtis, McLaughlin James, Nguyen Tramy, Roehner Nicholas, Bartley Bryan, Bhatia Swapnil, Bissell Mike, Clancy Kevin, Gorochowski Thomas, Grünberg Raik, Luna Augustin, Le Novère Nicolas, Pocock Matthew, Sauro Herbert, Sexton John T., Stan Guy-Bart, Tabor Jeffrey J., Voigt Christopher A., Zundel Zach, Myers Chris, Beal Jacob, Wipat Anil
Published 2018-03-01

Synthetic Biology Open Language (SBOL) Version 2.2.0

by Cox Robert Sidney, Madsen Curtis, McLaughlin James Alastair, Nguyen Tramy, Roehner Nicholas, Bartley Bryan, Beal Jacob, Bissell Michael, Choi Kiri, Clancy Kevin, Grünberg Raik, Macklin Chris, Misirli Goksel, Oberortner Ernst, Pocock Matthew, Samineni Meher, Zhang Michael, Zhang Zhen, Zundel Zach, Gennari John H., Myers Chris, Sauro Herbert, Wipat Anil
Published 2018-04-01

SBOL Visual: A Graphical Language for Genetic Designs

by Quinn, Jacqueline Y., Cox, Robert Sidney, Adler, Aaron, Beal, Jacob, Bhatia, Swapnil, Cai, Yizhi, Chen, Joanna, Clancy, Kevin, Galdzicki, Michal, Hillson, Nathan J., Le Novère, Nicolas, Maheshwari, Akshay J., McLaughlin, James Alastair, Myers, Chris J., P, Umesh, Pocock, Matthew, Rodriguez, Cesar, Soldatova, Larisa, Stan, Guy-Bart V., Swainston, Neil, Wipat, Anil, Sauro, Herbert M.
Published 2015

COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project

by Bergmann, Frank T, Adams, Richard, Moodie, Stuart, Cooper, Jonathan, Glont, Mihai, Golebiewski, Martin, Hucka, Michael, Laibe, Camille, Miller, Andrew K, Nickerson, David P, Olivier, Brett G, Rodriguez, Nicolas, Sauro, Herbert M, Scharm, Martin, Soiland-Reyes, Stian, Waltemath, Dagmar, Yvon, Florent, Le Novère, Nicolas
Published 2014