Using Gene Ontology to describe the role of the neurexin-neuroligin-SHANK complex in human, mouse and rat and its relevance to autism

by Patel, Sejal, Roncaglia, Paola, Lovering, Ruth C.
Published 2015

DNA Damage in Mammalian Neural Stem Cells Leads to Astrocytic Differentiation Mediated by BMP2 Signaling through JAK-STAT

by Schneider, Leonid, Pellegatta, Serena, Favaro, Rebecca, Pisati, Federica, Roncaglia, Paola, Testa, Giuseppe, Nicolis, Silvia K., Finocchiaro, Gaetano, d’Adda di Fagagna, Fabrizio
Published 2013

The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments

by Roncaglia, Paola, Martone, Maryann E, Hill, David P, Berardini, Tanya Z, Foulger, Rebecca E, Imam, Fahim T, Drabkin, Harold, Mungall, Christopher J, Lomax, Jane
Published 2013

TermGenie – a web-application for pattern-based ontology class generation

by Dietze, Heiko, Berardini, Tanya Z, Foulger, Rebecca E, Hill, David P, Lomax, Jane, Osumi-Sutherland, David, Roncaglia, Paola, Mungall, Christopher J
Published 2014

Adhesion to Carbon Nanotube Conductive Scaffolds Forces Action-Potential Appearance in Immature Rat Spinal Neurons

by Fabbro, Alessandra, Sucapane, Antonietta, Toma, Francesca Maria, Calura, Enrica, Rizzetto, Lisa, Carrieri, Claudia, Roncaglia, Paola, Martinelli, Valentina, Scaini, Denis, Masten, Lara, Turco, Antonio, Gustincich, Stefano, Prato, Maurizio, Ballerini, Laura
Published 2013

Dissecting the transcriptional phenotype of ribosomal protein deficiency: implications for Diamond-Blackfan Anemia

by Aspesi, Anna, Pavesi, Elisa, Robotti, Elisa, Crescitelli, Rossella, Boria, Ilenia, Avondo, Federica, Moniz, Hélène, Da Costa, Lydie, Mohandas, Narla, Roncaglia, Paola, Ramenghi, Ugo, Ronchi, Antonella, Gustincich, Stefano, Merlin, Simone, Marengo, Emilio, Ellis, Steven R., Follenzi, Antonia, Santoro, Claudio, Dianzani, Irma
Published 2014

Effects of Pin1 Loss in HdhQ111 Knock-in Mice

by Agostoni, Elena, Michelazzi, Silvia, Maurutto, Marta, Carnemolla, Alisia, Ciani, Yari, Vatta, Paolo, Roncaglia, Paola, Zucchelli, Silvia, Leanza, Giampiero, Mantovani, Fiamma, Gustincich, Stefano, Santoro, Claudio, Piazza, Silvano, Del Sal, Giannino, Persichetti, Francesca
Published 2016

Blood transcriptomics of drug-naïve sporadic Parkinson’s disease patients

by Calligaris, Raffaella, Banica, Mihaela, Roncaglia, Paola, Robotti, Elisa, Finaurini, Sara, Vlachouli, Christina, Antonutti, Lucia, Iorio, Francesco, Carissimo, Annamaria, Cattaruzza, Tatiana, Ceiner, Andrea, Lazarevic, Dejan, Cucca, Alberto, Pangher, Nicola, Marengo, Emilio, di Bernardo, Diego, Pizzolato, Gilberto, Gustincich, Stefano
Published 2015

Genome-wide expression profiling and functional characterization of SCA28 lymphoblastoid cell lines reveal impairment in cell growth and activation of apoptotic pathways

by Mancini, Cecilia, Roncaglia, Paola, Brussino, Alessandro, Stevanin, Giovanni, Lo Buono, Nicola, Krmac, Helena, Maltecca, Francesca, Gazzano, Elena, Bartoletti Stella, Anna, Calvaruso, Maria Antonietta, Iommarini, Luisa, Cagnoli, Claudia, Forlani, Sylvie, Le Ber, Isabelle, Durr, Alexandra, Brice, Alexis, Ghigo, Dario, Casari, Giorgio, Porcelli, Anna Maria, Funaro, Ada, Gasparre, Giuseppe, Gustincich, Stefano, Brusco, Alfredo
Published 2013

Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology

by Hill, David P, Adams, Nico, Bada, Mike, Batchelor, Colin, Berardini, Tanya Z, Dietze, Heiko, Drabkin, Harold J, Ennis, Marcus, Foulger, Rebecca E, Harris, Midori A, Hastings, Janna, Kale, Namrata S, de Matos, Paula, Mungall, Christopher J, Owen, Gareth, Roncaglia, Paola, Steinbeck, Christoph, Turner, Steve, Lomax, Jane
Published 2013

Mesencephalic dopaminergic neurons express a repertoire of olfactory receptors and respond to odorant-like molecules

by Grison, Alice, Zucchelli, Silvia, Urzì, Alice, Zamparo, Ilaria, Lazarevic, Dejan, Pascarella, Giovanni, Roncaglia, Paola, Giorgetti, Alejandro, Garcia-Esparcia, Paula, Vlachouli, Christina, Simone, Roberto, Persichetti, Francesca, Forrest, Alistair RR, Hayashizaki, Yoshihide, Carloni, Paolo, Ferrer, Isidro, Lodovichi, Claudia, Plessy, Charles, Carninci, Piero, Gustincich, Stefano
Published 2014

Extending gene ontology in the context of extracellular RNA and vesicle communication

by Cheung, Kei-Hoi, Keerthikumar, Shivakumar, Roncaglia, Paola, Subramanian, Sai Lakshmi, Roth, Matthew E., Samuel, Monisha, Anand, Sushma, Gangoda, Lahiru, Gould, Stephen, Alexander, Roger, Galas, David, Gerstein, Mark B., Hill, Andrew F., Kitchen, Robert R., Lötvall, Jan, Patel, Tushar, Procaccini, Dena C., Quesenberry, Peter, Rozowsky, Joel, Raffai, Robert L., Shypitsyna, Aleksandra, Su, Andrew I., Théry, Clotilde, Vickers, Kasey, Wauben, Marca H.M., Mathivanan, Suresh, Milosavljevic, Aleksandar, Laurent, Louise C.
Published 2016

Tools and data services registry: a community effort to document bioinformatics resources

by Ison, Jon, Rapacki, Kristoffer, Ménager, Hervé, Kalaš, Matúš, Rydza, Emil, Chmura, Piotr, Anthon, Christian, Beard, Niall, Berka, Karel, Bolser, Dan, Booth, Tim, Bretaudeau, Anthony, Brezovsky, Jan, Casadio, Rita, Cesareni, Gianni, Coppens, Frederik, Cornell, Michael, Cuccuru, Gianmauro, Davidsen, Kristian, Vedova, Gianluca Della, Dogan, Tunca, Doppelt-Azeroual, Olivia, Emery, Laura, Gasteiger, Elisabeth, Gatter, Thomas, Goldberg, Tatyana, Grosjean, Marie, Grüning, Björn, Helmer-Citterich, Manuela, Ienasescu, Hans, Ioannidis, Vassilios, Jespersen, Martin Closter, Jimenez, Rafael, Juty, Nick, Juvan, Peter, Koch, Maximilian, Laibe, Camille, Li, Jing-Woei, Licata, Luana, Mareuil, Fabien, Mičetić, Ivan, Friborg, Rune Møllegaard, Moretti, Sebastien, Morris, Chris, Möller, Steffen, Nenadic, Aleksandra, Peterson, Hedi, Profiti, Giuseppe, Rice, Peter, Romano, Paolo, Roncaglia, Paola, Saidi, Rabie, Schafferhans, Andrea, Schwämmle, Veit, Smith, Callum, Sperotto, Maria Maddalena, Stockinger, Heinz, Vařeková, Radka Svobodová, Tosatto, Silvio C.E., de la Torre, Victor, Uva, Paolo, Via, Allegra, Yachdav, Guy, Zambelli, Federico, Vriend, Gert, Rost, Burkhard, Parkinson, Helen, Løngreen, Peter, Brunak, Søren
Published 2016