Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics

by Reeder, Jens, Giegerich, Robert
Published 2004

pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows

by Reeder, Jens, Steffen, Peter, Giegerich, Robert
Published 2007

Extrapolation of Urn Models via Poissonization: Accurate Measurements of the Microbial Unknown

by Lladser, Manuel E., Gouet, Raúl, Reeder, Jens
Published 2011

Defining seasonal marine microbial community dynamics

by Gilbert, Jack A, Steele, Joshua A, Caporaso, J Gregory, Steinbrück, Lars, Reeder, Jens, Temperton, Ben, Huse, Susan, McHardy, Alice C, Knight, Rob, Joint, Ian, Somerfield, Paul, Fuhrman, Jed A, Field, Dawn
Published 2012

Cognitive Deficits, Changes in Synaptic Function, and Brain Pathology in a Mouse Model of Normal Aging

by Weber, Martin, Wu, Tiffany, Hanson, Jesse E., Alam, Nazia M., Solanoy, Hilda, Ngu, Hai, Lauffer, Benjamin E., Lin, Han H., Dominguez, Sara L., Reeder, Jens, Tom, Jennifer, Steiner, Pascal, Foreman, Oded, Prusky, Glen T., Scearce-Levie, Kimberly
Published 2015

Human gut microbiome viewed across age and geography

by Yatsunenko, Tanya, Rey, Federico E., Manary, Mark J., Trehan, Indi, Dominguez-Bello, Maria Gloria, Contreras, Monica, Magris, Magda, Hidalgo, Glida, Baldassano, Robert N., Anokhin, Andrey P., Heath, Andrew C., Warner, Barbara, Reeder, Jens, Kuczynski, Justin, Caporaso, J. Gregory, Lozupone, Catherine A., Lauber, Christian, Clemente, Jose Carlos, Knights, Dan, Knight, Rob, Gordon, Jeffrey I.
Published 2012

Integrated exome and transcriptome sequencing reveals ZAK isoform usage in gastric cancer

by Liu, Jinfeng, McCleland, Mark, Stawiski, Eric W., Gnad, Florian, Mayba, Oleg, Haverty, Peter M., Durinck, Steffen, Chen, Ying-Jiun, Klijn, Christiaan, Jhunjhunwala, Suchit, Lawrence, Michael, Liu, Hanbin, Wan, Yinan, Chopra, Vivek, Yaylaoglu, Murat B., Yuan, Wenlin, Ha, Connie, Gilbert, Houston N., Reeder, Jens, Pau, Gregoire, Stinson, Jeremy, Stern, Howard M., Manning, Gerard, Wu, Thomas D., Neve, Richard M., de Sauvage, Frederic J., Modrusan, Zora, Seshagiri, Somasekar, Firestein, Ron, Zhang, Zemin
Published 2014