Partner-Aware Prediction of Interacting Residues in Protein-Protein Complexes from Sequence Data

by Ahmad, Shandar, Mizuguchi, Kenji
Published 2011

Homology-based prediction of interactions between proteins using Averaged One-Dependence Estimators

by Murakami, Yoichi, Mizuguchi, Kenji
Published 2014

TargetMine, an Integrated Data Warehouse for Candidate Gene Prioritisation and Target Discovery

by Chen, Yi-An, Tripathi, Lokesh P., Mizuguchi, Kenji
Published 2011

Prediction of Detailed Enzyme Functions and Identification of Specificity Determining Residues by Random Forests

by Nagao, Chioko, Nagano, Nozomi, Mizuguchi, Kenji
Published 2014

An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework

by Chen, Yi-An, Tripathi, Lokesh P., Mizuguchi, Kenji
Published 2016

Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical membrane proteins

by Ahmad, Shandar, Singh, Yumlembam Hemajit, Paudel, Yogesh, Mori, Takaharu, Sugita, Yuji, Mizuguchi, Kenji
Published 2010

Prediction of dinucleotide-specific RNA-binding sites in proteins

by Fernandez, Michael, Kumagai, Yutaro, Standley, Daron M, Sarai, Akinori, Mizuguchi, Kenji, Ahmad, Shandar
Published 2011

Functional site plasticity in domain superfamilies☆

by Dessailly, Benoit H., Dawson, Natalie L., Mizuguchi, Kenji, Orengo, Christine A.
Published 2013

Lipid recognition propensities of amino acids in membrane proteins from atomic resolution data

by Morita, Mizuki, Katta, AVSK Mohan, Ahmad, Shandar, Mori, Takaharu, Sugita, Yuji, Mizuguchi, Kenji
Published 2011

Integrated Pathway Clusters with Coherent Biological Themes for Target Prioritisation

by Chen, Yi-An, Tripathi, Lokesh P., Dessailly, Benoit H., Nyström-Persson, Johan, Ahmad, Shandar, Mizuguchi, Kenji
Published 2014

Ligand-induced Ordering of the C-terminal Tail Primes STING for Phosphorylation by TBK1

by Tsuchiya, Yuko, Jounai, Nao, Takeshita, Fumihiko, Ishii, Ken J., Mizuguchi, Kenji
Published 2016

PoSSuM v.2.0: data update and a new function for investigating ligand analogs and target proteins of small-molecule drugs

by Ito, Jun-ichi, Ikeda, Kazuyoshi, Yamada, Kazunori, Mizuguchi, Kenji, Tomii, Kentaro
Published 2015

Brefeldin A-inhibited guanine nucleotide-exchange protein 3 (BIG3) is predicted to interact with its partner through an ARM-type α-helical structure

by Chen, Yi-An, Murakami, Yoichi, Ahmad, Shandar, Yoshimaru, Tetsuro, Katagiri, Toyomasa, Mizuguchi, Kenji
Published 2014

Sagace: A web-based search engine for biomedical databases in Japan

by Morita, Mizuki, Igarashi, Yoshinobu, Ito, Maori, Chen, Yi-An, Nagao, Chioko, Sakaguchi, Yuki, Sakate, Ryuichi, Masui, Tohru, Mizuguchi, Kenji
Published 2012

Profiles of microRNA networks in intestinal epithelial cells in a mouse model of colitis

by Lee, Juneyoung, Park, Eun Jeong, Yuki, Yoshikazu, Ahmad, Shandar, Mizuguchi, Kenji, Ishii, Ken J., Shimaoka, Motomu, Kiyono, Hiroshi
Published 2015

Identification and classification of bacterial Type III toxin–antitoxin systems encoded in chromosomal and plasmid genomes

by Blower, Tim R., Short, Francesca L., Rao, Feng, Mizuguchi, Kenji, Pei, Xue Y., Fineran, Peter C., Luisi, Ben F., Salmond, George P. C.
Published 2012

The Chemotherapeutic Agent DMXAA as a Unique IRF3-Dependent Type-2 Vaccine Adjuvant

by Tang, Choon Kit, Aoshi, Taiki, Jounai, Nao, Ito, Junichi, Ohata, Keiichi, Kobiyama, Kouji, Dessailly, Benoit H., Kuroda, Etsushi, Akira, Shizuo, Mizuguchi, Kenji, Coban, Cevayir, Ishii, Ken J.
Published 2013

BIG3 Inhibits the Estrogen-Dependent Nuclear Translocation of PHB2 via Multiple Karyopherin-Alpha Proteins in Breast Cancer Cells

by Kim, Nam-Hee, Yoshimaru, Tetsuro, Chen, Yi-An, Matsuo, Taisuke, Komatsu, Masato, Miyoshi, Yasuo, Tanaka, Eiji, Sasa, Mitsunori, Mizuguchi, Kenji, Katagiri, Toyomasa
Published 2015

Targeting BIG3–PHB2 interaction to overcome tamoxifen resistance in breast cancer cells

by Yoshimaru, Tetsuro, Komatsu, Masato, Matsuo, Taisuke, Chen, Yi-An, Murakami, Yoichi, Mizuguchi, Kenji, Mizohata, Eiichi, Inoue, Tsuyoshi, Akiyama, Miki, Yamaguchi, Rui, Imoto, Seiya, Miyano, Satoru, Miyoshi, Yasuo, Sasa, Mitsunori, Nakamura, Yusuke, Katagiri, Toyomasa
Published 2013

Conformational plasticity of JRAB/MICAL-L2 provides “law and order” in collective cell migration

by Sakane, Ayuko, Yoshizawa, Shin, Nishimura, Masaomi, Tsuchiya, Yuko, Matsushita, Natsuki, Miyake, Kazuhisa, Horikawa, Kazuki, Imoto, Issei, Mizuguchi, Chiharu, Saito, Hiroyuki, Ueno, Takato, Matsushita, Sachi, Haga, Hisashi, Deguchi, Shinji, Mizuguchi, Kenji, Yokota, Hideo, Sasaki, Takuya
Published 2016