A Generic Program for Multistate Protein Design

by Leaver-Fay, Andrew, Jacak, Ron, Stranges, P. Benjamin, Kuhlman, Brian
Published 2011

SwiftLib: rapid degenerate-codon-library optimization through dynamic programming

by Jacobs, Timothy M., Yumerefendi, Hayretin, Kuhlman, Brian, Leaver-Fay, Andrew
Published 2015

De Novo Enzyme Design Using Rosetta3

by Richter, Florian, Leaver-Fay, Andrew, Khare, Sagar D., Bjelic, Sinisa, Baker, David
Published 2011

Modeling Symmetric Macromolecular Structures in Rosetta3

by DiMaio, Frank, Leaver-Fay, Andrew, Bradley, Phil, Baker, David, André, Ingemar
Published 2011

Structure-guided forcefield optimization

by Song, Yifan, Tyka, Michael, Leaver-Fay, Andrew, Thompson, James, Baker, David
Published 2011

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

by Davis, Ian W., Leaver-Fay, Andrew, Chen, Vincent B., Block, Jeremy N., Kapral, Gary J., Wang, Xueyi, Murray, Laura W., Arendall, W. Bryan, Snoeyink, Jack, Richardson, Jane S., Richardson, David C.
Published 2007

RosettaScripts: A Scripting Language Interface to the Rosetta Macromolecular Modeling Suite

by Fleishman, Sarel J., Leaver-Fay, Andrew, Corn, Jacob E., Strauch, Eva-Maria, Khare, Sagar D., Koga, Nobuyasu, Ashworth, Justin, Murphy, Paul, Richter, Florian, Lemmon, Gordon, Meiler, Jens, Baker, David
Published 2011

Adding Diverse Noncanonical Backbones to Rosetta: Enabling Peptidomimetic Design

by Drew, Kevin, Renfrew, P. Douglas, Craven, Timothy W., Butterfoss, Glenn L., Chou, Fang-Chieh, Lyskov, Sergey, Bullock, Brooke N., Watkins, Andrew, Labonte, Jason W., Pacella, Michael, Kilambi, Krishna Praneeth, Leaver-Fay, Andrew, Kuhlman, Brian, Gray, Jeffrey J., Bradley, Philip, Kirshenbaum, Kent, Arora, Paramjit S., Das, Rhiju, Bonneau, Richard
Published 2013