Evaluation of Methods for De Novo Genome Assembly from High-Throughput Sequencing Reads Reveals Dependencies That Affect the Quality of the Results

by Haiminen, Niina, Kuhn, David N., Parida, Laxmi, Rigoutsos, Isidore
Published 2011

Correction: Evaluation of Methods for De Novo Genome Assembly from High-Throughput Sequencing Reads Reveals Dependencies That Affect the Quality of the Results

by Haiminen, Niina, Kuhn, David N., Parida, Laxmi, Rigoutsos, Isidore
Published 2011

Correction: Evaluation of Methods for De Novo Genome Assembly from High-Throughput Sequencing Reads Reveals Dependencies That Affect the Quality of the Results

by Haiminen, Niina, Kuhn, David N., Parida, Laxmi, Rigoutsos, Isidore
Published 2011

A genetically anchored physical framework for Theobroma cacao cv. Matina 1-6

by Saski, Christopher A, Feltus, Frank A, Staton, Margaret E, Blackmon, Barbara P, Ficklin, Stephen P, Kuhn, David N, Schnell, Raymond J, Shapiro, Howard, Motamayor, Juan Carlos
Published 2011

iXora: exact haplotype inferencing and trait association

by Utro, Filippo, Haiminen, Niina, Livingstone, Donald, Cornejo, Omar E, Royaert, Stefan, Schnell, Raymond J, Motamayor, Juan Carlos, Kuhn, David N, Parida, Laxmi
Published 2013

Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening

by Dautt-Castro, Mitzuko, Ochoa-Leyva, Adrian, Contreras-Vergara, Carmen A., Pacheco-Sanchez, Magda A., Casas-Flores, Sergio, Sanchez-Flores, Alejandro, Kuhn, David N., Islas-Osuna, Maria A.
Published 2015

Sequencing of a QTL-rich region of the Theobroma cacao genome using pooled BACs and the identification of trait specific candidate genes

by Feltus, Frank A, Saski, Christopher A, Mockaitis, Keithanne, Haiminen, Niina, Parida, Laxmi, Smith, Zachary, Ford, James, Staton, Margaret E, Ficklin, Stephen P, Blackmon, Barbara P, Cheng, Chun-Huai, Schnell, Raymond J, Kuhn, David N, Motamayor, Juan-Carlos
Published 2011

Promoting Utilization of Saccharum spp. Genetic Resources through Genetic Diversity Analysis and Core Collection Construction

by Nayak, Spurthi N., Song, Jian, Villa, Andrea, Pathak, Bhuvan, Ayala-Silva, Tomas, Yang, Xiping, Todd, James, Glynn, Neil C., Kuhn, David N., Glaz, Barry, Gilbert, Robert A., Comstock, Jack C., Wang, Jianping
Published 2014

The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color

by Motamayor, Juan C, Mockaitis, Keithanne, Schmutz, Jeremy, Haiminen, Niina, III, Donald Livingstone, Cornejo, Omar, Findley, Seth D, Zheng, Ping, Utro, Filippo, Royaert, Stefan, Saski, Christopher, Jenkins, Jerry, Podicheti, Ram, Zhao, Meixia, Scheffler, Brian E, Stack, Joseph C, Feltus, Frank A, Mustiga, Guiliana M, Amores, Freddy, Phillips, Wilbert, Marelli, Jean Philippe, May, Gregory D, Shapiro, Howard, Ma, Jianxin, Bustamante, Carlos D, Schnell, Raymond J, Main, Dorrie, Gilbert, Don, Parida, Laxmi, Kuhn, David N
Published 2013