Analyzing large biological datasets with association networks

by Karpinets, Tatiana V., Park, Byung H., Uberbacher, Edward C.
Published 2012

Binding Motifs in Bacterial Gene Promoters Modulate Transcriptional Effects of Global Regulators CRP and ArcA

by Leuze, Michael R., Karpinets, Tatiana V., Syed, Mustafa H., Beliaev, Alexander S., Uberbacher, Edward C.
Published 2012

RNA:protein ratio of the unicellular organism as a characteristic of phosphorous and nitrogen stoichiometry and of the cellular requirement of ribosomes for protein synthesis

by Karpinets, Tatiana V, Greenwood, Duncan J, Sams, Carl E, Ammons, John T
Published 2006

Enhancing a Pathway-Genome Database (PGDB) to capture subcellular localization of metabolites and enzymes: the nucleotide-sugar biosynthetic pathways of Populus trichocarpa

by Nag, Ambarish, Karpinets, Tatiana V., Chang, Christopher H., Bar-Peled, Maor
Published 2012

BESC knowledgebase public portal†

by Syed, Mustafa H., Karpinets, Tatiana V., Parang, Morey, Leuze, Michael R., Park, Byung H., Hyatt, Doug, Brown, Steven D., Moulton, Steve, Galloway, Michael D., Uberbacher, Edward C.
Published 2012

Novel algorithmic approach predicts tumor mutation load and correlates with immunotherapy clinical outcomes using a defined gene mutation set

by Roszik, Jason, Haydu, Lauren E., Hess, Kenneth R., Oba, Junna, Joon, Aron Y., Siroy, Alan E., Karpinets, Tatiana V., Stingo, Francesco C., Baladandayuthapani, Veera, Tetzlaff, Michael T., Wargo, Jennifer A., Chen, Ken, Forget, Marie-Andrée, Haymaker, Cara L., Chen, Jie Qing, Meric-Bernstam, Funda, Eterovic, Agda K., Shaw, Kenna R., Mills, Gordon B., Gershenwald, Jeffrey E., Radvanyi, Laszlo G., Hwu, Patrick, Futreal, P. Andrew, Gibbons, Don L., Lazar, Alexander J., Bernatchez, Chantale, Davies, Michael A., Woodman, Scott E.
Published 2016