BLASTPLOT: a PERL module to plot next generation sequencing NCBI-BLAST results

by Herrera-Galeano, Jesus Enrique, Frey, Kenneth G, Cer, Regina Z, Mateczun, Alfred J, Bishop-Lilly, Kimberly A, Mokashi, Vishwesh P
Published 2014

Bioinformatic Characterization of Mosquito Viromes within the Eastern United States and Puerto Rico: Discovery of Novel Viruses

by Frey, Kenneth G., Biser, Tara, Hamilton, Theron, Santos, Carlos J., Pimentel, Guillermo, Mokashi, Vishwesh P., Bishop-Lilly, Kimberly A.
Published 2016

Comparison of three next-generation sequencing platforms for metagenomic sequencing and identification of pathogens in blood

by Frey, Kenneth G, Herrera-Galeano, Jesus Enrique, Redden, Cassie L, Luu, Truong V, Servetas, Stephanie L, Mateczun, Alfred J, Mokashi, Vishwesh P, Bishop-Lilly, Kimberly A
Published 2014

Full-Genome Sequence of Human Betacoronavirus 2c Jordan-N3/2012 after Serial Passage in Mammalian Cells

by Frey, Kenneth G., Redden, Cassie L., Bishop-Lilly, Kimberly A., Johnson, Reed, Hensley, Lisa E., Raviprakash, Kanakatte, Luke, Thomas, Kochel, Tad, Mokashi, Vishwesh P., Defang, Gabriel N.
Published 2014

Targeted amplification for enhanced detection of biothreat agents by next-generation sequencing

by Gardner, Shea N., Frey, Kenneth G., Redden, Cassie L., Thissen, James B., Allen, Jonathan E., Allred, Adam F., Dyer, Matthew D., Mokashi, Vishwesh P., Slezak, Tom R.
Published 2015

Genome Sequencing of 18 Francisella Strains To Aid in Assay Development and Testing

by Johnson, Shannon L., Daligault, Hajnalka E., Davenport, Karen W., Coyne, Susan R., Frey, Kenneth G., Koroleva, Galina I., Broomall, Stacey M., Bishop-Lilly, Kimberly A., Bruce, David C., Chertkov, Olga, Freitas, Tracey, Jaissle, James, Ladner, Jason T., Rosenzweig, C. Nicole, Gibbons, Henry S., Palacios, Gustavo F., Redden, Cassie L., Xu, Yan, Minogue, Timothy D., Chain, Patrick S.
Published 2015

Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica

by Johnson, Shannon L., Daligault, Hajnalka E., Davenport, Karen W., Jaissle, James, Frey, Kenneth G., Ladner, Jason T., Broomall, Stacey M., Bishop-Lilly, Kimberly A., Bruce, David C., Coyne, Susan R., Gibbons, Henry S., Lo, Chien-Chi, Munk, A. Christine, Rosenzweig, C. Nicole, Koroleva, Galina I., Palacios, Gustavo F., Redden, Cassie L., Xu, Yan, Minogue, Timothy D., Chain, Patrick S.
Published 2015

Complete Genome Sequences for 35 Biothreat Assay-Relevant Bacillus Species

by Johnson, Shannon L., Daligault, Hajnalka E., Davenport, Karen W., Jaissle, James, Frey, Kenneth G., Ladner, Jason T., Broomall, Stacey M., Bishop-Lilly, Kimberly A., Bruce, David C., Gibbons, Henry S., Coyne, Susan R., Lo, Chien-Chi, Meincke, Linda, Munk, A. Christine, Koroleva, Galina I., Rosenzweig, C. Nicole, Palacios, Gustavo F., Redden, Cassie L., Minogue, Timothy D., Chain, Patrick S.
Published 2015

Complete Genome Sequences for 59 Burkholderia Isolates, Both Pathogenic and Near Neighbor

by Johnson, Shannon L., Bishop-Lilly, Kimberly A., Ladner, Jason T., Daligault, Hajnalka E., Davenport, Karen W., Jaissle, James, Frey, Kenneth G., Koroleva, Galina I., Bruce, David C., Coyne, Susan R., Broomall, Stacey M., Li, Po-E, Teshima, Hazuki, Gibbons, Henry S., Palacios, Gustavo F., Rosenzweig, C. Nicole, Redden, Cassie L., Xu, Yan, Minogue, Timothy D., Chain, Patrick S.
Published 2015

Correction for Johnson et al., Complete Genome Sequences for 59 Burkholderia Isolates, Both Pathogenic and Near Neighbor

by Johnson, Shannon L., Bishop-Lilly, Kimberly A., Ladner, Jason T., Daligault, Hajnalka E., Davenport, Karen W., Jaissle, James, Frey, Kenneth G., Koroleva, Galina I., Bruce, David C., Coyne, Susan R., Broomall, Stacey M., Ketheesan, Natkunam, Mayo, Mark, Hoffmaster, Alex, Elrod, Mindy Glass, Wuthiekanun, Vanaporn, Tuanyok, Apichai, Norton, Robert, Currie, Bart J., Wagner, David M., Keim, Paul, Li, Po-E, Teshima, Hazuki, Gibbons, Henry S., Palacios, Gustavo F., Rosenzweig, C. Nicole, Redden, Cassie L., Xu, Yan, Minogue, Timothy D., Chain, Patrick S.
Published 2016

Genomic Comparison of Escherichia coli O104:H4 Isolates from 2009 and 2011 Reveals Plasmid, and Prophage Heterogeneity, Including Shiga Toxin Encoding Phage stx2

by Ahmed, Sanaa A., Awosika, Joy, Baldwin, Carson, Bishop-Lilly, Kimberly A., Biswas, Biswajit, Broomall, Stacey, Chain, Patrick S. G., Chertkov, Olga, Chokoshvili, Otar, Coyne, Susan, Davenport, Karen, Detter, J. Chris, Dorman, William, Erkkila, Tracy H., Folster, Jason P., Frey, Kenneth G., George, Matroner, Gleasner, Cheryl, Henry, Matthew, Hill, Karen K., Hubbard, Kyle, Insalaco, Joseph, Johnson, Shannon, Kitzmiller, Aaron, Krepps, Michael, Lo, Chien-Chi, Luu, Truong, McNew, Lauren A., Minogue, Timothy, Munk, Christine A., Osborne, Brian, Patel, Mohit, Reitenga, Krista G., Rosenzweig, C. Nicole, Shea, April, Shen, Xiaohong, Strockbine, Nancy, Tarr, Cheryl, Teshima, Hazuki, van Gieson, Eric, Verratti, Kathleen, Wolcott, Mark, Xie, Gary, Sozhamannan, Shanmuga, Gibbons, Henry S.
Published 2012